Citrobacter rodentium: ROD_04421
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Entry
ROD_04421 CDS
T01145
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_04421 (sbcD)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ROD_04421 (sbcD)
Archaeal homologous recombinant proteins
ROD_04421 (sbcD)
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SSDB
Ortholog
Paralog
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Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
CBG87222
UniProt:
D2TKY1
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All DBs
Position
complement(493188..494390)
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AA seq
400 aa
AA seq
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MRLLHTSDWHLGQNFYSKSRAAEHQAFLDWLLSTATEQQVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVRLQQTGCHLVVLAGNHDSVATLNESREILAFLNTTVVASAGCAPHILHRRDG
TPGAVLCPIPFLRPRDIVTSQAGLSGQEKQQHLLSAITDYYQQQYHEACALRGERALPII
ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQKIGGTEHIRYCGS
PIALSFDECGKSKCVHLVSFENGRLMSVESLTVPITQPLAVLKGDLAAISEQLEQWRDSR
QSPPVWLDIEITTDEYLHDIQRKIQALTETLPVEVLLVRRSREQRESMLSSERRETLSEL
SVDEVFERRLAQVELAEPQRQRLTALFHTTVQALAGEDVA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcctgcacacctctgactggcatctgggacaaaatttttacagcaaaagccgc
gccgcggaacatcaggcctttctcgactggctgctgagcacggcgacagaacagcaggtg
gacgccattattgtcgcaggcgacattttcgacaccggttcgccgccaagctacgcccgc
gaactgtataaccggtttgtcgtcaggctacagcaaacgggctgccatctggtggtgctg
gcgggcaatcatgactctgtcgccacgctcaacgagtcccgcgagattctggcgtttctg
aataccaccgttgtcgccagcgccggttgcgcgccgcacatcctgcatcgacgcgacggc
acgccgggcgcggtactgtgcccgataccgtttttacgcccgcgtgacattgtgaccagt
caggcggggctaagcggccaggaaaagcagcagcacctgctgagcgcgataaccgactac
tatcagcagcagtatcatgaagcctgcgcgctgcgcggcgaacgcgcgctgccgattatc
gccaccggccacctgaccaccgtgggcgcgagtaaaagcgacgccgtacgcgacatttac
atcgggacgctggatgcctttcctgcgcaaaatttcccgcctgccgattatatcgccctg
ggccatatccaccgggcgcagaaaattggcggcacagaacatatccgttattgcggttcc
cccatcgccctgagctttgacgagtgcggtaaaagcaagtgcgtgcatctggtgagcttt
gaaaacggcaggctgatgagcgtcgaaagtctcaccgtaccaataacccagccgctggcg
gtgctgaaaggcgatcttgccgctattagcgaacagcttgagcagtggcgggacagcagg
cagtcgccgccggtctggctggatatcgaaatcaccaccgacgagtatctccacgatata
cagcgcaaaatccaggccctgaccgaaacgctgcccgtcgaggtgctgttggtgcgccgc
agccgggagcagcgcgagagcatgttaagcagcgaacgacgtgagacgctgagcgaactg
agcgtcgacgaagtctttgaacgccgcctggcgcaggtggagctggcagaaccccagcgc
cagcggctgaccgcgctgtttcataccaccgtacaggcgctcgccggggaggatgtcgca
tga
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