Citrobacter rodentium: ROD_04711
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Entry
ROD_04711 CDS
T01145
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cro
Citrobacter rodentium
Pathway
cro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ROD_04711 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_04711 (xseB)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ROD_04711 (xseB)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ROD_04711 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
EAD5
Motif
Other DBs
NCBI-ProteinID:
CBG87250
UniProt:
D2TL09
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All DBs
Position
complement(524314..524556)
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AA seq
80 aa
AA seq
DB search
MPKKNEAPVSFETSLNELEQIVSRLESGDLPLDEALNEFERGVQLARQGQLKLQQAEQRV
QILLSDDEDATPEPFSPDNA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaaaatgaggcgcccgtcagctttgagacatcgctgaacgagctggagcaa
attgtgtcccgtctggaaagtggcgacctgccgctggacgaggcgctgaacgaattcgaa
cgcggcgtgcagctggcgcgtcagggccagctaaagctgcagcaggctgaacagcgtgtg
caaattcttctctctgacgacgaagacgcaacccctgagcctttttcaccggataacgcg
taa
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