Citrobacter rodentium: ROD_05281
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Entry
ROD_05281 CDS
T01145
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cro
Citrobacter rodentium
Pathway
cro03030
DNA replication
cro03430
Mismatch repair
cro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROD_05281 (dnaX)
03430 Mismatch repair
ROD_05281 (dnaX)
03440 Homologous recombination
ROD_05281 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cro03032
]
ROD_05281 (dnaX)
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_05281 (dnaX)
Enzymes [BR:
cro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ROD_05281 (dnaX)
DNA replication proteins [BR:
cro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ROD_05281 (dnaX)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ROD_05281 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
ResIII
AAA_2
AAA_16
AAA_14
AAA_7
AAA_assoc_2
PIF1
nSTAND3
TsaE
HrcA
Motif
Other DBs
NCBI-ProteinID:
CBG87307
UniProt:
D2TLU7
LinkDB
All DBs
Position
587379..589310
Genome browser
AA seq
643 aa
AA seq
DB search
MSYQVLARKWRPQSFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRHQLEHILDEEHIAHEPRALQLLSRAADGSLRDALSLTDQAIASGDGQITTQAVSAM
LGTLDDDQALSLVEAVVAADGERVMSLVNEAAARGIEWEALLVEMLGLLHRIALVQLSPA
ALGSDMAMIEVRMRELARTVPPTDVQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPETPRQSFAPVAPTAVMNPTQVPQQSAPAPQQTPAAPLPDATSQVLAARSQLQ
RAQGATKAKKSEPAAATRARPVNNAALERLASVTERVQARPAPSALEQAPAKKEAYRWKA
TTPVAEVKKVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA
LNAWKKENGNAVCLHLRSSQRHLNSAGAQQKLAEALSELAGTTVELTIVEDDNPATRTPL
EWRQAIYEEKLAQARESIVADNNIQNLRRFFDAELDEESIRPI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttttagcccgaaaatggcgtccacaatcctttgctgacgtagtcggc
caggaacatgtgctgaccgccctggcgaacggcttatcgttagggcgtattcaccacgca
tatcttttttccggtacccgcggggtcggtaaaacctctatcgcccgtctgctggcgaag
ggactgaactgcgaaaccgggattaccgccacgccttgcggcgtatgcgacaactgccgt
gaaatcgagcagggtcggtttgtcgatctgattgagattgatgccgcgtcgcgcaccaaa
gtagaggatacccgcgatctgctggataacgtgcagtacgcgcctgcgcgcggtcgtttt
aaagtttatctgatcgacgaagtgcacatgctgtcccgccacagctttaacgcgctgctg
aaaacccttgaagagccgccggcgcacgtaaaattcctgctggcgaccaccgatccgcag
aagctgccggtgactattttatcccgctgcctgcagttccatcttaaggcgctggatgtc
gatcagatccgccatcagcttgagcacattcttgatgaagagcacatcgcgcatgaacct
cgcgcgctgcaactgctctcccgcgcggcggacggcagcctgcgcgatgcgctcagcctg
accgatcaggccatcgccagcggtgacggccagattaccacccaggcggtgagcgcgatg
ctcggtacgctggatgacgatcaggcgctgtcgctggttgaagcggtggtcgccgccgac
ggcgaacgcgtgatgtcgctggtgaacgaggcggcggcgcgggggatcgaatgggaagcg
ctgctggtggaaatgctcggcctgctgcaccgcattgcgctggtccagctttcgcccgcc
gcgctgggtagtgacatggcgatgattgaagtgcggatgcgtgaactggcgcgtaccgta
ccgccaacggacgtacagctttattaccagacgttgctgattggccgcaaagagctgcct
tacgcgccggatcggcggatgggggtggagatgaccctgctgcgcgcgctggccttccac
ccgcgtatgccgttgccggaaccggagacgccgcgtcagtcctttgcgcccgttgccccg
acagcggtaatgaacccgacgcaggtgccgcaacagtcagcgccagcgccgcagcagacg
ccagccgcgccgttgcccgacgccaccagtcaggtgctggcggcgcgcagtcagctgcag
cgcgcgcagggagcaaccaaagcaaaaaagagtgaaccggcagccgctacccgcgcgcgg
ccggtgaataacgctgcgctggagaggctggcatcggttacggaacgcgtgcaggcgcgt
ccggcgccgtcggcgctcgaacaggcgccggcgaaaaaagaggcctatcgctggaaggcg
accacgccggtcgccgaggtgaaaaaggttgtcgccacgccgaaagcgctaaagaaagcg
ctggagcatgaaaagacgccagagctggcggcgaagctggcagcggaggctatcgaacgc
gatccgtgggcggcgcaggtcagtcagctatcgctgccgaagctggttgaacaggtggcg
ctcaacgcctggaaaaaagagaacggcaacgcggtctgcctgcatttacgctccagccag
cgtcacctgaactccgcgggcgcgcagcaaaagctggccgaagcgctgagcgagctggcg
ggaacaacggttgaactgactatcgtagaagatgataatccggcgacgcgtacgccgctg
gagtggcgtcaggcgatatatgaagaaaaacttgcgcaggcgcgcgagtcgatagttgcg
gataataacatccagaacctgcgtcgattctttgatgcggagctggatgaagagagtatt
cgtcccatttga
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