Citrobacter rodentium: ROD_05671
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Entry
ROD_05671 CDS
T01145
Name
(GenBank) putative mechanosensitive ion channel protein
KO
K16053
miniconductance mechanosensitive channel
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cro02000
]
ROD_05671
Transporters [BR:
cro02000
]
Other transporters
Pores ion channels [TC:
1
]
ROD_05671
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Paralog
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF4405
BatA
Motif
Other DBs
NCBI-ProteinID:
CBG87345
UniProt:
D2TMK3
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Position
complement(629872..631119)
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AA seq
415 aa
AA seq
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MQELITQVEELAGIEMNPTTSLVMIFGIIFLTAVIVHIILHWVVLRTFEKRAIASSRLWL
QIITQNKLFHRLAFTLQGIIVNIQAALWLQKGSDAAEILTTCAQLWIMMYALLSLFSLLD
VILNLSQKLPAASQLPLKGIFQGIKLIGAIIVGILMISLLIGQSPAILISGLGAMAAVLM
LVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIP
TWSLVSDSFKNWSGMSASGGRRIKRSISIDATSIHFLDEDEKARLYKAHLLKPYLDSRHQ
EIDEWNQQLNVPESVLNHRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPDDHGLP
LEIYAFTNTVVWLEYESIQADIFDHIFAVVEEFGLRIHQSPTGNDIRSLSSAFAK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttaattacgcaagtcgaagaacttgcgggcattgaaatgaatcccaccacc
tcgctggtgatgattttcggtattatctttcttaccgccgttatcgtgcatattattctg
cactgggtggtattacgcacattcgaaaaacgcgccatcgccagttcccgcctgtggctg
caaattattacgcaaaataagttatttcaccgtctggcgtttaccctgcaggggattatc
gtcaatattcaggcggcgctgtggctgcagaaaggcagcgacgccgcagaaatattaacg
acctgcgctcagctatggatcatgatgtatgccctgctgtcgctgttctctttgctggat
gtgattttaaatctgtcgcagaaattaccggcggcgtcgcagcttccgctgaaagggatt
tttcagggcattaagctgatcggcgcgatcatcgtcggcattctgatgatctcattatta
atcggccagtctcccgctattttgattagcggcctcggcgcaatggccgccgtcctgatg
ctggtgtttaaagatccgatactgggactggttgccggcattcagctttccgccaacgat
atgctcaagctgggcgactggctggagatgccgaaatacggcgccgacggcgcggtgatc
gacatcgggctgaccaccgtcaaggtgcgtaactgggataacaccattactaccatcccc
acctggtcgctggtgtcagactcctttaaaaactggagcggtatgtcggcttccggcggt
cggcgaattaagcgcagcatcagcattgacgccaccagcattcattttcttgatgaggat
gaaaaagcgcggctgtataaagcccacctgttgaaaccctatttagacagtcggcatcag
gaaatcgatgaatggaatcagcagctcaacgtgccggagtcggtattaaaccaccggcgg
atgaccaatatcggcaccttccgcgcctatctgaatgagtatttacgcaaccatccgcgc
attcggaaagacatgaccttaatggtgcgccagctggcgccggacgatcatggtctgcct
ctcgaaatttatgcctttaccaataccgtggtctggctggaatatgaaagtattcaggcc
gatattttcgaccatattttcgcggtggtggaagagtttggtttacgcattcatcagtcg
cctaccggcaacgacattcgctcgctctccagcgccttcgcaaaataa
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