Citrobacter rodentium: ROD_06531
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Entry
ROD_06531 CDS
T01145
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cro
Citrobacter rodentium
Pathway
cro00550
Peptidoglycan biosynthesis
cro01100
Metabolic pathways
cro01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROD_06531 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ROD_06531 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_06531 (mrdA)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ROD_06531 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ROD_06531 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
CBG87428
UniProt:
D2TNF9
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All DBs
Position
complement(714181..716082)
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AA seq
633 aa
AA seq
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MKRQNSFRDYTAESALFVRRALVAFSGILLLTGVLIANLYNLQIVRYTDYQTRSNENRIK
LVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQHTLDALRSVVDLTDDDIAAFK
KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS
KINDKDIERLDKEDKLANYAATHDIGKLGIERYYEEVLHGQTGYEEVEVNNRGRVIRQLK
EVPPQAGHDIYLTIDLKLQQYIETLLAGSRAAVIVTDPRTGGVLSLVSMPSYDPNLFVDG
ISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTSLFDPGWWQL
PGSEKRYRDWKKWGHGHLNVTKSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGID
LAEERSGNMPTREWKMKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGVVKV
PHLLMSTAENGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRGNGTAHKYFASAPYK
IAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAV
GTIMRQILDHIMLGDNNTSLPAENPAVAAAEDQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacagaactcttttcgcgactatacggctgagtccgcgctgtttgtgcgccgg
gcgctggtcgccttttcaggcatattgctgctcaccggcgtgctgatcgccaacctctat
aatctgcaaatcgtccggtataccgattatcagacccgctcgaatgaaaaccgcatcaag
ctggtgcctatcgcccccagccgcgggatcatctacgaccgtaacggcattccgctcgcc
cttaaccgcaccatctaccagattgaaatgatgccggagaaggttgataacgttcagcat
acccttgatgccctgcgcagcgtggtcgatcttaccgacgacgacattgccgccttcaaa
aaagagcgagcccgttcgcatcgtttcacctcgattccggtaaaaactaacctcaccgaa
gtgcaggtcgcacgatttgccgttaaccagtaccgtttccccggcgtcgaagtaaaaggc
tacaagcgccgctattatccttacggttcggcgctgacccacgtcatcggctatgtgtcg
aagatcaacgataaggacattgaacggcttgataaagaggacaagctggcgaattacgcc
gccacccacgatatcggcaagctggggattgagcgctactacgaagaggtactgcacggc
cagaccggttacgaagaggttgaagtcaacaaccggggccgcgttatccgccagcttaaa
gaggtgccgccgcaggccggacacgacatctaccttacgatagatttaaaactgcagcag
tatattgaaacgctgctcgccggaagccgggcggcggtgattgtgaccgatccccgcacc
ggcggcgtcctgtctctggtttccatgccaagctacgacccgaacctgttcgttgacggc
atctccagcaaagactattccgctctgcttaacgatccgaacactccactggttaaccgc
gccacgcaaggggtctacccgccagcgtcgacggtgaagccttacgttgccgtttccgcg
ctgagcgccggggtgattacccgcaataccagcctgtttgaccccggctggtggcagctg
cccggctcggaaaaacgctatcgcgactggaaaaaatggggccacggccatctgaacgtc
accaaatcgctggaggagtccgccgataccttcttctaccaggtcgcctatgacatgggg
atcgaccgcctttcggagtggatgggcaaattcggttatggccactataccggcatcgat
ctggcggaagagcgctccggcaacatgccaacccgcgaatggaagatgaagcgcttcaaa
aagccgtggtatcagggcgacaccatcccggtgggcatcggccagggctactggacggca
acgccgatccagatgagcaaagcgctgatgatcctgattaacgatggcgtggtgaaggtc
ccgcacctgctgatgagcaccgcagagaacggtaagcaagtgccgtgggtgcagccgcac
gaaccgccggtgggcgatatccactccggctactgggagctggcgaaagacggcatgtac
ggcgtggcgaaccgcggcaacggcacggcgcataaatattttgccagcgcgccctataag
attgcggccaaatccggtacggctcaggtcttcggcctgaaagccaatgaaacctataac
gcgcataaaattgccgaacgtctgcgcgaccacaagctgatgacggccttcgcgccctat
aacaacccgcaggtcgcggtcgccatgatcctcgaaaacggcggcgcaggtcccgcagtc
ggtacgattatgcgacagattcttgaccacattatgttgggcgataacaacaccagtctg
ccagcagaaaacccggcggttgcagcggcggaggatcaataa
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