Citrobacter rodentium: ROD_06991
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Entry
ROD_06991 CDS
T01145
Symbol
speF
Name
(GenBank) ornithine decarboxylase isozyme, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cro
Citrobacter rodentium
Pathway
cro00330
Arginine and proline metabolism
cro00480
Glutathione metabolism
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ROD_06991 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ROD_06991 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ROD_06991 (speF)
Enzymes [BR:
cro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ROD_06991 (speF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
CBG87473
UniProt:
D2TNK3
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All DBs
Position
complement(765278..767476)
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AA seq
732 aa
AA seq
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MSELKIAVSRSCPDCFSTQRSIVNVDETHFIDVAAVVLSVNDIERGKLDEIDATGYGIPV
FIATENEERVPADYLPRISGVFECHEARAAFYGRQLESAASHYETQLRPPFFRALVDYVN
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRADLCNADVAMGDLLIHEGAPCIAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFDESYLRELVSEVAPQRARDARPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQPRYVPHKRMNNAFMMHASTSPFYPLFAALDVNAKMHEGVSGRNM
WMDCVANGIDARKLILENCHHIRPFVPETVDSKPWHAYPTAEIANDLRFFHFVPGESWHA
FEGYAEHQYFVDPCKLLLTTPGINARTGEYDTFGVPATILANFLRENGVVPEKCDLNSIL
FLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYRQHEARYGGYTLRQLCQEMH
DLYARHNVKQLQKEMFRKAHFPRVSMNPQEANYAYLRGEVELVPLPQAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVLRYFSALEEGINLLPGFAPELQGVYIEERDGRKQVWCYVIKAR
EAQHDLLKGETV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattaaaaattgccgttagccgctcctgccctgactgtttttctacacaacgc
agtatagttaatgtcgatgaaacgcattttattgacgtggctgcggtagtattatccgtc
aacgatattgaacgaggaaaactcgatgaaatagacgcgaccggctacgggatcccggtg
tttatcgcaacggaaaatgaagagcgcgttccggccgattatctgccgcgcatttccggc
gtctttgaatgccatgaagcccgcgccgccttctatggtcgccagcttgaaagcgcggcg
agccattacgaaacgcagctgcgcccaccgttctttcgcgcgctggtcgattacgttaat
cagggaaacagcgcctttgactgtcccgggcatcagggcggcgagtttttccgtcgccac
ccggcaggcaaccagttcgttgagtattttggcgaaacgcttttccgcgccgatctgtgc
aacgctgacgtggcgatgggcgatctgctgatccacgaaggcgcgccgtgcattgctcaa
cagcatgcggcaaaagtgtttaacgccgataaaacctactttgtgctgaacggtacttca
tcgtcgaacaaagtggtgctcaatgcgctgttaacgccgggcgatctggtgctgttcgac
cgcaataaccacaagtcaaaccatcacggcgcactattacaggctggcgccaccccggtt
tacctggaaaccgcgcgtaatccgtatggttttatcggcgggattgacgcgcactgcttt
gacgaaagttacctgcgcgaactggtcagcgaagtggcaccgcagcgcgcccgcgacgcc
cgtccgttccgtctggccgtcattcagttaggcacttacgacggcactatctataacgcc
cgccaggtggtggataagattggtcatctgtgcgactacatcctgttcgactctgcgtgg
gtgggctacgagcagtttattccgatgatggcggactgctcgccgctgctgctggatctg
aacgaaaacgatccgggcatcctggtgacgcagtcggtgcataagcagcaggccgggttc
tcgcagacctcgcagatccataaaaaagacagccatatcaaaggccagccacgctatgtg
ccgcataagcgtatgaataacgcctttatgatgcatgcttccaccagcccgttctatccg
ctgtttgccgcgcttgacgttaacgccaaaatgcacgaaggggtcagcggtcgcaatatg
tggatggactgcgtggcgaacggtatcgacgcgcgtaaattgatcctcgaaaactgccat
catatccgtccgtttgtgccggaaacggtggacagcaagccgtggcacgcttacccaacg
gcggaaatcgccaacgatctgcgcttcttccactttgtgccgggggaaagctggcatgcg
tttgagggctacgccgagcatcagtattttgtcgacccctgcaagctgctgctgaccacc
ccgggcattaatgcacggaccggcgaatacgacaccttcggcgtaccggccactattctc
gccaacttcctgcgcgaaaacggcgtggtgccggaaaaatgcgacctcaactcgattctg
ttcctgctgaccccggctgaggatatggcgaaactgcaacagctcgtcgcgctgctggtg
cgcttcgagaagctgctggagtctgacgccccgctggcggaagttctgccgtccatctac
aggcagcatgaggcgcgctatggcggttacaccctgcgccagctgtgccaggagatgcac
gatctctacgcccgtcacaacgtcaaacagctgcaaaaagagatgttccgtaaggcgcat
ttcccgcgcgtcagcatgaatccgcaggaggccaattacgcctacctgcgcggcgaagtg
gagctggtgccgctgccgcaggccgaaggccgcattgccgccgaaggcgcgcttccttat
ccaccgggggtgctgtgcgtggtgccgggggaagtctggggcggcgcggtactgcgttac
ttcagcgcgctggaggaagggatcaacctgctgccgggctttgcgcctgagcttcagggc
gtttacatcgaagaacgtgatggccgcaagcaggtgtggtgctacgtgattaaagcgcgt
gaagcacagcacgacctgctgaaaggagaaacagtatga
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