Citrobacter rodentium: ROD_07801
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Entry
ROD_07801 CDS
T01145
Symbol
uvrB
Name
(GenBank) UvrABC system protein B (excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
cro
Citrobacter rodentium
Pathway
cro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ROD_07801 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_07801 (uvrB)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROD_07801 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ROD_07801 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
IF2_N
AAA_30
UB2H
AAA_22
PRDA1_C
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
CBG87557
UniProt:
D2TPI8
LinkDB
All DBs
Position
859630..861651
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHVEGTVPR
YTIYPKTHYVTPRERILQAMEEIKDELGERRKSLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRARASINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITASMAKAISETERRREKQQQYNAEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRSTAKADSVEMDMSPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcatttaaaccgtcaggcgatcagcccgaggcg
atccgccgcctgaaagaggggctggaggatggtctggcgcatcagacgctgcttggcgta
acgggatcggggaaaacgttcactatcgccaacgtgatcgcggatctccagcgtccgacg
atggtgctggcgccgaacaaaaccctggcggcgcagctgtacggcgagatgaaagagttc
ttcccggataacgccgtcgagtacttcgtctcctactacgactattaccagccggaagct
tacgtgcccagctccgataccttcatcgaaaaagatgcgtcggtaaacgagcatattgag
cagatgcgcctgtcggcgaccaaagcgctgctggaacgtcgcgacgtggtggtggtggcc
tcggtgtcggcgatctacggcctgggcgatccggacctgtatctgaagatgatgctgcac
ctgacggtggggatgattatcgaccagcgcgccatcctgcgccgtctggccgaactgcaa
tatacccgtaacgatcaggctttccagcgcggcaccttccgcgtgcgcggcgaggtgatt
gatatcttcccggcggaatccgacgacatcgcgctgcgcgtggagctgtttgacgaagag
gtggagcggctgtcgctgtttgacccgctgaccgggcatgtggaaggcaccgttccgcgc
tataccatctatcccaaaacgcactatgtgacgccgcgcgagcgcattttgcaggcgatg
gaagagattaaagacgaactgggcgagcggcggaaaagcctgctggcgaataacaagctg
ctggaagaacagcgcctgagccagcgtacccagtttgatcttgagatgatgaacgagctc
ggctactgctcggggattgaaaactactcgcgctatctctccgggcgcgggccgggcgag
ccgccgccgacgctgtttgactacctgccggcggacggcctgttagtcgttgatgaatcg
cacgtgaccattccgcagattggcggtatgtaccgcggcgaccgggcgcgtaaagagacg
ctggtggagtacggtttccgtctgccctccgcgctggataaccgtccgctgaagttcgag
gagtttgaggcgctggcgccgcagactatttacgtctccgcgacgccggggaactatgag
ctggagaaatcgggcggcgacgtggtggatcaggttgtacgtccgaccggcctgctggat
ccggtgatcgaggtgcgtccagtggcgacccaggtggacgatctgctctctgaaatccgc
gcccgcgcgtcaatcaacgagcgcgtgctggtcaccaccctgaccaaacggatggcggaa
gatctcaccgagtatctggaggagcacggcgagcgggtgcgttatctgcactcggacatc
gataccgttgagcggatggaaattattcgcgacctgcgcctgggcgagtttgacgtgctg
gtggggatcaacctgctgcgggaaggtctcgacatgccggaggtgtcgctggtagcgatt
cttgacgccgataaagaagggttcctgcgttccgaacgttcgctgattcagaccattggc
cgtgcggcgcgtaacgttaacggtaaagcgattctgtatggtgataagatcaccgcgtcg
atggcgaaggcgattagcgagaccgagcgtcgtcgggagaaacagcagcagtacaacgcc
gaacacggtattacgccgcaggggctgaacaagaaagtggtcgatattctggcgctgggg
cagaacatcgcgaagaccaaagcgaagggcaggggcaagtcacgctctacggcgaaggcg
gatagcgtcgagatggatatgtcgccgaaggcgctgcagcagaagatccacgagctggag
gggcagatgatgcagcatgcgcaaaacctcgagttcgaagaagcggcgcagatccgcgac
cagctgcatcagctacgcgagctgtttatcgcggcctcgtaa
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integrated database retrieval system
