Citrobacter rodentium: ROD_09801
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Entry
ROD_09801 CDS
T01145
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit (IHF-beta)
KO
K05788
integration host factor subunit beta
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cro03032
]
ROD_09801 (ihfB)
03036 Chromosome and associated proteins [BR:
cro03036
]
ROD_09801 (ihfB)
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_09801 (ihfB)
DNA replication proteins [BR:
cro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ROD_09801 (ihfB)
Chromosome and associated proteins [BR:
cro03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ROD_09801 (ihfB)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ROD_09801 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
MDMPI_C
FhbB
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CBG87759
UniProt:
D2TS48
LinkDB
All DBs
Position
1077881..1078165
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AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgcaacccagcaatctcatattcccgcgaaa
gcggttgaagatgcagtgaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagcttttctttgcactaccgcgctccccgtacc
gggcgcaacccgaagaccggcgataaagtcgagctggaaggcaaatatgttccgcacttc
aagccgggtaaagaactgcgcgatcgcgccaatatttacggttaa
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integrated database retrieval system
