Citrobacter rodentium: ROD_09861
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Entry
ROD_09861 CDS
T01145
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
cro
Citrobacter rodentium
Pathway
cro00541
Biosynthesis of various nucleotide sugars
cro01100
Metabolic pathways
cro01250
Biosynthesis of nucleotide sugars
Module
cro_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ROD_09861 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_09861 (kdsB)
Enzymes [BR:
cro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
ROD_09861 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Lipid A
ROD_09861 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
CBG87765
UniProt:
D2TS54
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Position
1084894..1085640
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AA seq
248 aa
AA seq
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MSFVVIIPARYASTRLPGKPLLDINGKPMIVHVLERARESGAERIIVATDHEEVARAVEA
AGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQ
VGMATLAVPIHGAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTFLR
HLGIYGYRAGFIRRYVNWQPSPLENIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTAEDL
ERVRAEMR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtcgtcatcattccggcgcgctatgcgtccacgcgcctgcccggcaaaccg
ctgctggatatcaatggtaagccgatgatcgtgcatgtgctggagcgcgcccgtgagtcc
ggcgccgaacgcatcatcgtcgccaccgaccacgaagaggtggcccgcgccgttgaggcg
gcgggcggcgaagtctgcatgacccgcgccgatcaccagtcgggcacagagcgtctggct
gaagtagtggaaaaatgcggtttcagcgacgataccgtcattgtcaacgtgcagggcgat
gagccgatgatcccggcggttattattcgccaggtggcagaaaatctggcccagcgtcag
gtgggaatggccacgctggctgtgccgattcacggcgcggaggaggcgtttaatcccaat
gcggtgaaggtggtgctggacgccgaaggctatgcgctttacttctcacgcgcgaccatc
ccgtgggatcgcgatcgtttcgccaaaagtctggaaaccgtcggtgacaccttcctgcgg
cacctgggaatttacggctatcgcgccggttttattcgccgttatgtgaactggcagccc
agcccgctggaaaatatcgaaatgctggagcagcttcgcgtactctggtacggcgaaaaa
atccacgtggcggtggcaaaagaagtccctggcaccggggtggatactgccgaagatctt
gagcgcgttcgcgctgagatgcgttaa
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