Citrobacter rodentium: ROD_11801
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Entry
ROD_11801 CDS
T01145
Name
(GenBank) putative peptidoglycan-binding protein
KO
K19236
L,D-transpeptidase YcfS
Organism
cro
Citrobacter rodentium
Pathway
cro01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ROD_11801
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cro01002
]
ROD_11801
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_11801
Peptidases and inhibitors [BR:
cro01002
]
Cysteine peptidases
Family C82
ROD_11801
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ROD_11801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
SH3_4
Motif
Other DBs
NCBI-ProteinID:
CBG87946
UniProt:
D2TTV1
LinkDB
All DBs
Position
complement(1269889..1270851)
Genome browser
AA seq
320 aa
AA seq
DB search
MNTMRLSRWLAFLTLAASMTLALPAQANSRPLPPPGSKLVGENKYHVVENNGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRPGSVLTIPLQTLLPDVPREGIVINLAELRLYYYPPGKD
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDADIETLFKQVTPGTKVNII
NTPIKASVEPDGARLVEVHQPLSKKIDDDPQMLPITLNSAMQAFRSAPQTDAAVMQHVME
VRSGMPVDVTRHHDVNPQAM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgatgcgactttcccgctggctggcctttttaactctcgccgccagcatgacg
cttgcgttgcccgcgcaggcgaacagcaggccccttccgccccccggcagcaagctggtg
ggcgaaaataaatatcacgttgtcgaaaacaacggcggttcactggaagcgatagcgaaa
aaatataacgttggttttctggcgcttttgcaggctaaccccggcgtcgacccctatgtg
ccgcgccccggcagcgtgttgactatcccgctgcaaaccctgctgccggacgtgccgcgc
gaaggcattgtgataaatctggctgagctgcgcctctattactatccgccgggtaaagac
tcggttaccgtctaccccatcggcattggtcaactgggcggcgatacgctcaccccgacg
atggtcacgaccgtttccgacaagcgcgccaacccaacctggacgccgacggcgaacatt
cgcgcgcgctataaagcgcagggcatcgagctgccagccgtggtgcccgcaggcccggat
aatccgatgggccatcacgccattcgcttagccgcctacggcggcgtctatctgttgcac
ggcactaacgccgattttggcatcgggatgcgggtcagctcaggctgcatccgcctgcgc
gacgccgatatcgaaacgctgtttaaacaggttacgccaggcaccaaagtcaatattatc
aacacgccgattaaagcctcggtagagccagacggcgcgcgtctggttgaggtgcaccag
ccgctgtcgaagaagattgatgacgatccgcagatgctgcctatcaccttaaacagcgcc
atgcaggcgttcaggagcgcgccgcagacggatgcggcagtgatgcagcacgtgatggag
gtgcgttcagggatgccggttgacgtcacccgccatcacgacgtgaacccgcaggcgatg
tga
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