Citrobacter rodentium: ROD_15421
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Entry
ROD_15421 CDS
T01145
Symbol
glgX
Name
(GenBank) putative glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
cro
Citrobacter rodentium
Pathway
cro00500
Starch and sucrose metabolism
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
Module
cro_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ROD_15421 (glgX)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
ROD_15421 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
CBG88306
UniProt:
D2TIH9
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All DBs
Position
complement(1636646..1638721)
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AA seq
691 aa
AA seq
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MSNGKAFEIRAGHCHQLGANYDGKGVNFALFSAHAERVELCLYDAGGEHEIARLTLPEFT
HEIWHGYVPDLEPGALYGYRVYGPFDPENGHRFNPHKLLIDPYARELVGDIQWNEAHFAY
ELDHEDKDLSFDTRDSAPFTPKCRVVDPNAFDWQDNHRPDIPWPNAIVYETHVKGFTFLN
PAIPDELRGTFEGMGHSASVEYIKSLGITSVELLPVHWFPDDQHLLDKGLKNFWGYNTLG
FFAPATRYYGPRGIQGFRDMVRAFHDAGIEVILDVVYNHTAEGNELGPTLSFKGIDNFSY
YRTLPDQHRYYINDTGTGNTVNTSHPRVLQMVMDSLRYWAESMHIDGFRFDLGTILGREP
EGFDQRGGFFDAIMQDPVLSKLKLIGEPWDIGPGGYQVGGFPPGWGEWNDKYRDTVREYW
KGDNVSTDFAARLLGSGDLYDLRGRRPWASVNFVTAHDGFTLNDLVSYNEKHNEANGEDN
NDGHNDNRSYNYGVEGPTDDEAIIATRERQKRNFLATLLFSHGTPMLLAGDEFGRSQGGN
NNGYCQDSEISWVHWENLPESAQALREFTRHLIQLRKAQPLLRRENWRDGMVIQWYNAGG
GLQQPEQWDEGSTLGVYIGRPDLETEEGIWHDVLLLLNPFEGSVPFSIPETGEGGWVLEL
STAGDEGQGTVIETETDFELAGRSFALFRRP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggcaaagctttcgaaatcagagcagggcactgtcaccagttaggggcgaac
tatgacggcaaaggggtcaactttgcccttttttccgcccacgccgaacgcgtcgaactc
tgcctgtacgatgcgggcggggaacatgaaatcgcccgtctgaccttaccggagtttacc
catgagatctggcatggctatgtgccggatcttgaaccgggcgcgctctatggctaccgg
gtttacggcccttttgacccggaaaacggccatcgttttaatccacataagctattaatc
gacccctacgccagagaactggtgggcgatattcagtggaacgaagcgcacttcgcttat
gaactggatcatgaagacaaagatctcagcttcgacacccgcgacagcgccccgtttacg
ccgaaatgccgggtggtcgatcccaacgcctttgactggcaggataaccatcgtcctgat
attccctggcccaatgccatcgtgtatgaaacgcacgttaaaggctttaccttcctgaat
cccgctattcctgacgaactgcgcggcaccttcgaagggatggggcattccgccagcgtg
gagtacattaaaagtctcggcatcacttccgttgagttgctgccggtacactggttcccg
gacgaccagcatttgctcgataaggggctgaaaaacttctggggctataacacgctgggc
tttttcgcccccgcgacgcgctattatggaccgcgcggcattcagggctttcgcgatatg
gtgcgcgcgtttcacgatgcgggtatcgaagtcattcttgacgtggtttataaccatacg
gcggaagggaatgagctgggacccactctgtcgttcaaggggatcgacaacttctcctat
taccggacgctgcccgaccagcatcgctattacatcaacgataccgggaccggtaatacg
gtaaacacctcacacccgcgggtgctgcaaatggtgatggattctttgcgctactgggcg
gagtcgatgcatatcgacggcttccgctttgatttgggaactatcctcgggcgtgagccg
gaaggatttgaccagcgcggcggcttctttgacgcaataatgcaggacccggtgctgtcg
aaactgaagctgattggcgaaccgtgggacatcggtccgggagggtatcaggttggcggt
ttcccgcccggctggggagagtggaacgacaaataccgcgacacggtgcgcgagtactgg
aagggcgataatgtttcgaccgattttgccgcgcgcttgttgggatctggcgatctctac
gacctgcgcggacgccgaccgtgggcaagcgtcaattttgtgaccgcgcatgacggcttt
accctgaacgacctggtctcctataacgaaaagcacaacgaggcgaatggcgaagataac
aacgacggtcataacgataaccgatcgtacaattatggcgtggaaggccctaccgacgac
gaagccattatcgccacgcgcgagcgtcagaagcgtaatttcctcgccacgctgttattc
tcccacggcaccccgatgctgctggcaggcgatgaatttggccgcagccagggcgggaat
aataacggttactgtcaggacagcgagatctcctgggttcactgggagaatttaccggaa
tccgcccaggcgctgcgagaatttacccgtcatcttattcaactgagaaaagcacagccg
ttgctacggcgtgagaactggcgggacgggatggtgatccagtggtacaacgccggcggc
gggctgcaacagccagagcagtgggacgaaggctccactctcggggtatatatcgggcgt
cccgatctcgaaactgaagaggggatctggcacgacgttttgctgttgctcaatccgttt
gaaggcagcgtccccttcagcatccctgaaacgggcgaaggcggatgggtgcttgaactc
tccaccgccggagacgaggggcagggcacggtcattgaaaccgaaaccgattttgaactc
gccgggcgtagtttcgccttattccggaggccataa
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