Citrobacter rodentium: ROD_17621
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Entry
ROD_17621 CDS
T01145
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
cro
Citrobacter rodentium
Pathway
cro01501
beta-Lactam resistance
cro02010
ABC transporters
cro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROD_17621 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROD_17621 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ROD_17621 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cro02000
]
ROD_17621 (oppD)
Transporters [BR:
cro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
ROD_17621 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
ABC_ATPase
Formyl_trans_C_2
ATP-synt_ab
DUF87
SQHop_cyclase_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
CBG88519
UniProt:
D2TL70
LinkDB
All DBs
Position
complement(1869070..1870083)
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AA seq
337 aa
AA seq
DB search
MSVIETAAAPLAQQRANALLDVKDLRVTFSTPDGDVTTVNDLNFTLRAGETLGIVGESGS
GKSQTAFALMGLLAANGRTGGSAVFNGREILNLPERELNRLRAEQMSMIFQDPMTSLNPY
MRVGEQLMEVLILHKGMSKAEAFEESVRMLDAVKMPEARKRMKMFPHEFSGGMRQRVMIA
MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL
VMYAGRTMEYGNARDVFYRPVHPYSIGLLGAVPRLDAEGEEMLTIPGNPPNLLRLPQGCP
FQPRCPWAMEVCSSTPPLEEFSPGRLRACFKPVEDLV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaattgaaaccgcagccgcgccgctggcgcagcaaagggctaacgcactgctg
gatgtaaaagatcttcgcgtgaccttcagtaccccggatggcgatgtcaccaccgtcaac
gacctgaactttacgctgcgtgccggggaaaccttaggcattgtcggtgagtccggttca
ggcaaatcgcagaccgcctttgcgctgatggggctgttggcggcaaatggccggaccggc
ggttcggcggtctttaacggccgcgaaatcctcaatttgccggagcgcgaactgaacagg
ctacgcgccgagcaaatgtcgatgattttccaggacccgatgacgtcgctgaacccgtat
atgcgcgttggcgagcagctgatggaggtgctgatcctgcataaaggcatgagcaaggcc
gaggcgttcgaggagtccgtgcgtatgcttgatgcggtcaaaatgcctgaagcgcgcaag
cgtatgaaaatgttcccgcatgaattttccggcgggatgcgtcagcgcgtgatgattgcg
atggcgctgctgtgtcggccaaaactgctgattgccgatgaaccgacgacagcgctggac
gtgaccgtgcaggcgcaaatcatgaccttgctcaacgagctgaagcgggaatttaatacc
gccatcattatgattactcacgatcttggcgtcgtcgcggggatttgcgacaaagttctg
gtgatgtatgcggggcggacgatggagtacggtaacgcacgcgatgtcttttatcgcccg
gttcatccctattcgattggtctgctgggcgcggtgccgcgcctcgatgccgaaggggaa
gagatgctgactattccgggtaacccgccgaacctgctgcgtttaccgcaaggctgcccg
tttcagccgcgctgtccctgggcgatggaggtatgcagcagcacgccgccgctggaggag
ttcagtccggggcggctgcgcgcctgctttaaaccggtggaggatctggtatga
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