Citrobacter rodentium: ROD_18151
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Entry
ROD_18151 CDS
T01145
Symbol
lpfD
Name
(GenBank) putative fimbrial adhesin
KO
K07345
major type 1 subunit fimbrin (pilin)
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cro02044
]
ROD_18151 (lpfD)
02035 Bacterial motility proteins [BR:
cro02035
]
ROD_18151 (lpfD)
Secretion system [BR:
cro02044
]
Chaperone-usher system
Type 1 pilus assembly protein
ROD_18151 (lpfD)
Bacterial motility proteins [BR:
cro02035
]
Pilus system
Fimbrial proteins
ROD_18151 (lpfD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fimbrial
MrkDrd
Motif
Other DBs
NCBI-ProteinID:
CBG88570
UniProt:
D2TLZ3
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All DBs
Position
complement(1932546..1933487)
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AA seq
313 aa
AA seq
DB search
MRKIYFLLGVLLLAFARMCLADECGITSPLFQSVSLGNVLVQRDTPPGAEIARVRASGFI
ELTAFSPTGVVNCQGGYTFNYLSATPAAISGVYNTNLAGVGIKVSVDAGNFILPSRGANI
KTLYYVGNYDVILYKTGEITPGLLTPGLVATGWYDSPENEFMRISLGGNNQVSVLACSLT
SQVINFNLGDINASEFSERPGFIPAYSDTQHLGLNCDPAANINVELVGTQNPDAIAEPGV
LALNGQGNPGIADGVGIQFIYNGIPLQVNNRIVLKRSAGGQEMFPLTARYYQTKAIVKPG
RADATATLNITYQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaaaatttattttttattgggcgttttactgctggcattcgcccgaatgtgcctg
gccgacgagtgcggaataacatcgcccttatttcagagcgtctcgctgggcaatgtgctg
gtgcagcgggatacgccgccaggggccgagatagcccgtgtcagagcctcaggcttcatc
gaattaacggctttttctccgacaggcgtcgtcaattgtcagggcggatacacctttaat
tacttatcagcgacgcctgcagccatcagtggggtttataatactaatcttgcgggagta
ggcataaaagtgtcagttgatgcgggaaattttatattgccctctcgtggcgcgaatatt
aaaacgttgtattacgttggcaattatgacgttatcctttacaaaaccggggaaataacg
cccggcctgttaacgccaggattagtcgccaccggctggtatgactcgccagaaaacgaa
tttatgcgcatttctttgggggggaataaccaggtttcggtactggcctgttcgctcacc
agccaggtcattaactttaatcttggggatattaatgccagcgaattttccgaacgtccc
ggttttattccggcctatagcgatacgcaacatctgggactgaactgcgatcccgcagcc
aacattaatgtcgaactggtgggaacgcaaaacccggatgcgattgccgaacccggcgtg
ctggcgctcaacggacagggaaatcccggtatcgctgatggcgtagggatccagtttatt
tataacggtattccgttacaggtgaataaccgcattgttctgaaacgttcagccggggga
caggagatgtttccgctgacggcacgctattaccagacgaaggcgattgtaaaaccggga
cgcgccgatgcgacggcgacgctgaatattacttatcaatag
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