Citrobacter rodentium: ROD_18441
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Entry
ROD_18441 CDS
T01145
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cro
Citrobacter rodentium
Pathway
cro00061
Fatty acid biosynthesis
cro00071
Fatty acid degradation
cro01100
Metabolic pathways
cro01212
Fatty acid metabolism
cro02024
Quorum sensing
cro04146
Peroxisome
Module
cro_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ROD_18441 (fadD)
00071 Fatty acid degradation
ROD_18441 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ROD_18441 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROD_18441 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cro01004
]
ROD_18441 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cro04147
]
ROD_18441 (fadD)
Enzymes [BR:
cro01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ROD_18441 (fadD)
Lipid biosynthesis proteins [BR:
cro01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ROD_18441 (fadD)
Exosome [BR:
cro04147
]
Exosomal proteins
Exosomal proteins of breast milk
ROD_18441 (fadD)
Exosomal proteins of breast cancer cells
ROD_18441 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CBG88599
UniProt:
D2TM22
LinkDB
All DBs
Position
complement(1963029..1964714)
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AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPAEINPDRYQSLVELFEHAVARYADQPAFVNMGEVMTFRKLEERSRA
FAAWLQEGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVEKTQVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRSALHAGYRMQYVKPEVVSEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKA
TYGPLLHPGKELVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSALHLSAGGGMPVQQAVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPDQPGELCIKGPQVMLGYWQ
RPDATDEIIKDGWLHTGDIAVMDDEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
LEVAAVGVPSGSSGEAVKIFVVKKDATLTDEALVTFCRRHLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARSKVDNKG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaggtttggttaaaccgttatcccgcggatgtgcctgcggagatcaatcctgac
cgttatcaatccctggtggaactgtttgaacatgctgtcgcgcgctacgctgaccagcca
gcgttcgtcaatatgggggaggtgatgaccttccgcaagcttgaagagcgcagccgcgcc
tttgccgcctggctgcaggaagggctggggctgaaaaagggcgaccgcgtcgcgctgatg
atgccgaacctgttgcagtatcctgtggcgctgtttggcattctgcgcgccgggatgatc
gtggtgaacgttaacccgctgtataccccgcgcgaactggagcatcagcttaacgacagc
ggcgcggcggcgatcgtcatcgtttccaacttcgcccatactctggaaaaagtggttgag
aaaacccaggttcagcacgttatcctgacccgcatgggcgaccagctgtcgacggcgaaa
gggacgctggtgaactttgtcgtcaaatacatcaaacggctggtgccgaagtatcacctg
ccggatgccatctcctttcgcagcgcgctgcatgctggctaccgtatgcagtacgtgaag
ccggaagtggtgtctgaagacctggcgtttttacaatataccggcggtactaccggcgtg
gcgaaaggggcgatgcttacgcaccgtaatatgctggccaacctcgagcaggtgaaagcc
acctacgggccgctgctgcatccgggcaaggagctggtggtcaccgcgctgccgctgtat
cacattttcgcgctgaccatgaactgcctgctgtttatcgaactgggcggacagaacctg
ctgatcaccaacccgcgcgacattccggggctggtgaaagagctggcgaaatacccgttt
accgccatgaccggggtcaataccctgtttaacgccctgcttaacaataaagagtttcag
cagctggatttctctgccctgcatctttccgccggcggcgggatgccggtgcagcaggcg
gtggcggagcgctgggtaaaactcaccgggcaatatttgctggaaggctacggcctgacg
gagtgcgcgccgctggtcagcgttaatccgcatgatattgattatcatagcggcagcatt
ggcctgccggtgccgtccacggaagcgaaactggtggacgatgacgacaacgaagtgccg
ccggatcagcccggcgaactgtgcattaaaggtcctcaggtgatgctcggctactggcag
cgcccggacgctaccgacgagatcattaaggacggctggctgcacaccggcgatatcgcg
gtgatggacgacgaaggcttcctgcgcattgtcgatcgtaaaaaagatatgattctggta
tctggcttcaacgtctatccgaatgagattgaagatgtggtgatgcagcatccgggcgtg
ctggaggtggccgccgtcggcgttccgtccggcagcagcggcgaagcggtgaagatcttc
gtggtgaaaaaagacgcgacgctgaccgatgaggcgctggtcaccttctgccgccgccac
ctgaccggttataaggtgcctaagttggtggagttccgcgacgaactgccaaaatcaaac
gtcggcaaaattttacgtcgggaattgcgtgacgaagcccgcagcaaagtagacaataag
ggctga
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