Citrobacter rodentium: ROD_18971
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Entry
ROD_18971 CDS
T01145
Name
(GenBank) putative peptidoglycan-binding peptidase
KO
K19304
murein DD-endopeptidase [EC:3.4.24.-]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cro01002
]
ROD_18971
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_18971
Peptidases and inhibitors [BR:
cro01002
]
Metallo peptidases
Family M23
ROD_18971
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
ROD_18971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Csd3_N2
Peptidase_M23
LysM_OapA
OapA_N
NMB0315_dom_I
LysM
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
CBG88651
UniProt:
D2TMU5
LinkDB
All DBs
Position
complement(2017137..2018459)
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AA seq
440 aa
AA seq
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MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHPDSAPIVKTIELEKSEIR
SLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVSTGDTLSSILNQYGIDMSDI
AQLAASDKELRNLKIGQQLSWTLTADGDLQRLTWEMSRRETRTYDRTAANAFKMTAETQQ
GDWVNSLLKGTVGGSFVASAKNAGLTSAEISAVIKAMQWQMDFRKLKKGDEFAVLMSREM
LDGKREQSQLLGVRLRSGGKDYYAIRAEDGKFYDRNGTGLAKGFLRFPTAKQFRVSSNFN
PRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGEVVVAKRSGAAGYYVAVRHGRTYTTRY
MHLRKLLVKPGQKVKRGDRIALSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLTG
KDRADYLAQVKQVVPQLRFD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacagatagcccgctctgtcgccctggcatttaataatctgccaagaccccatcgc
gttatgctggggtcgcttaccgttcttaccctggccgtcgcagtatggcggccttatgtt
taccaccctgattccgcccccatcgttaaaaccatcgaactggaaaaaagcgaaattcgt
tctctgctccccgaggccagcgagcctatcgaccaggcggcgcaggaggatgaagccatt
cctcaggacgaactggacgataaaatcgcgggtgaagcaggcgtccatgaatacgttgtc
tctaccggcgatacgctgagcagtattcttaatcagtacggcattgatatgagcgatatc
gcccagctcgccgcttcggataaagaactgcgtaacctgaagattggtcaacagctctcc
tggacgctgactgcggacggcgatttacagcgtctgacctgggaaatgtcgcgtcgggag
acgcggacctatgaccgcacggcggcaaacgcttttaaaatgaccgctgaaacgcagcag
ggtgactgggttaacagcctgctgaaaggcacggtcggcggcagctttgtcgccagcgct
aaaaatgccgggctgaccagcgctgaaatcagcgcggtaatcaaagcgatgcagtggcag
atggacttccgtaagctgaaaaaaggtgatgagttcgcggtgctgatgtcgcgtgagatg
ctggacggtaagcgcgagcagagccagctgcttggcgtgcgcctgcgctccggaggcaag
gactattatgcgatccgcgccgaagacggtaaattttacgatcgtaacggaaccgggctg
gcgaaaggcttcctgcgtttcccgaccgccaaacagttccgcgtctcctctaacttcaat
ccgcgtcgtactaacccggtaacgggccgcgttgcgcctcaccgtggcgttgacttcgcc
atgccgcagggaacgccggtactttccgttggcgatggcgaagtggtggtcgcgaagcgc
agcggcgcggcaggctactatgtggcggtgcgtcatggtcgtacctataccacccgttat
atgcacctgcgcaagctgctggtgaaaccggggcagaaggttaaacgcggcgaccgtatt
gcgctctccggtaataccggacgttccacaggtccgcatctgcattatgaagtatggatt
aaccagcaggcggttaacccgctgacggcgaaactgccgcgcaccgaaggtctgaccggt
aaggatcgggcggattatctggcgcaggttaagcaggttgtgccgcagctgcgatttgat
taa
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