Citrobacter rodentium: ROD_19041
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Entry
ROD_19041 CDS
T01145
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
cro
Citrobacter rodentium
Pathway
cro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ROD_19041 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_19041 (ruvC)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
ROD_19041 (ruvC)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ROD_19041 (ruvC)
RecFOR pathway proteins
ROD_19041 (ruvC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
CBG88658
UniProt:
D2TMV2
LinkDB
All DBs
Position
complement(2023510..2024034)
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AA seq
174 aa
AA seq
DB search
MMSIILGIDPGSRVTGYGVIRQVGRQLTYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQF
QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQSLPVFEYAARQVKQTVVGIGSAEK
SQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtccatcattctgggtatagaccccggctcccgcgttaccggttatggcgtgatt
cgccaggttggccgccagctgacctatctcggcagcggttgcattcgcaccaaagtggac
gatctcccgtcgcgcctgaagctgatttatgccggcgtgacggaaatcatcacccagttc
cagccggactactttgccattgagcaggtgtttatggcgaaaaatgcggattctgcgctt
aagctggggcaggcgcgcggcgtggcgattgtcgcggcggtcaaccagtcgctaccggta
tttgagtacgcggcgcgtcaggtgaagcagaccgtggtgggcatcggcagcgcggaaaaa
agccaggtgcaacatatggtgcgcaccttgctgaaacttccggctaacccgcaggcggat
gcggcggatgcgctggcgatcgccatcacgcactgccacgtcagccagaatgcgatgcaa
atgagcgagtcgcgcctcaatcttgcgcgaggccgtttgcgataa
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