Citrobacter rodentium: ROD_20111
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Entry
ROD_20111 CDS
T01145
Symbol
amyA
Name
(GenBank) cytoplasmic alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
cro
Citrobacter rodentium
Pathway
cro00500
Starch and sucrose metabolism
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ROD_20111 (amyA)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
ROD_20111 (amyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Glyco_hydro_70
Alpha-amy_C_pro
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
CBG88763
UniProt:
D2TNR9
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All DBs
Position
2118906..2120393
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AA seq
495 aa
AA seq
DB search
MKNPTLLQFFHWYYPDGGRLWQEVAERADGLNDIGINMVWLPPACKGASGGYSVGYDCYD
LFDLGEFDQKGSVATKYGDKQQLLAAIDSLKRNQIAVLLDVVVNHKMGADEKEAIRIQRV
NEDDRNQIDDHIIDCEGWTRYTFPARAGKYSQFIWDYKCFSGIDHIENPTEDGIFKIVND
YTGEGWNDQVDDEMGNFDYLMGENIDFRNRAVTEEIKYWARWVMDQTHCDGFRLDAVKHI
PAWFYREWIEHVQEVAPEPLFIVAEYWSHDVDTLQNYINQVEGKTMLFDAPLQMKFHEAS
RQGREYDMRQIFSGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLREN
GVPSVFYPDLYGAHYEDTGDDGGTYPIDMPVIEQLDQLILARQRFAHGVQTLYFDHPNCI
AFSRSGTEDDPGCVVVLSNGDDGEKTLALGANYGNKTWRDYLGNRDERVVTDENGEATFY
CNGGSVSVWVIEEAI
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcccactttattgcagttcttccactggtattaccccgacggcggcaggctc
tggcaggaagttgccgagcgcgcggacgggctcaatgatatcggtattaatatggtctgg
ctgcctccggcgtgtaaaggcgcatcgggcggctattctgtcggctacgactgctatgac
ctatttgatctgggcgaatttgatcaaaaaggatcggtcgccaccaaatatggcgacaaa
caacagctgctggcggcgatcgactcgctgaaacgaaaccagattgcagtgctgctcgac
gtggtggtaaaccacaaaatgggcgccgacgaaaaagaagcgattcgcatccagcgggtc
aacgaagacgatcgtaatcagattgatgaccacatcatcgactgcgaaggctggacgcgc
tacaccttccctgcccgcgccgggaaatattcgcagtttatctgggattacaaatgtttc
agcggtatcgaccacattgaaaaccccaccgaggacggcatctttaaaatcgtcaacgac
tataccggcgaaggctggaacgatcaggtcgacgatgagatgggcaactttgactacctg
atgggcgaaaatatcgatttccgcaaccgcgccgtgacggaggagatcaaatactgggcc
cgctgggtgatggatcaaacccactgcgacggcttccgtcttgatgcggtaaagcacatt
ccggcctggttttacagggagtggatagaacacgtgcaggaggtcgcgccagagccgctg
tttatcgtcgcggaatactggtcgcatgatgtcgatacgctgcaaaactacattaatcag
gtagaagggaaaacgatgctgtttgacgcccctctgcagatgaagtttcatgaggcctcc
cgccaggggcgcgagtacgatatgcggcagatcttcagcggtacgctggtggaggccgat
ccgtttcatgcggtaacgctggtcgccaaccacgatacccagccgctgcaggcgctggaa
gcgccggttgagccttggtttaaaccgctggcctacgcgctgatcctgctgcgggaaaac
ggcgtgccctccgtattctatcccgatctctacggcgcgcactatgaagataccggcgac
gatggcggcacctatcccatcgacatgccggtgattgagcagcttgaccagcttattctc
gcccgtcagcgtttcgctcacggcgttcagacgctctattttgaccatcccaactgcatc
gccttcagccgcagcggcacagaagacgatcccggctgcgtggtggtgctttccaacggc
gatgatggcgaaaagacccttgcgcttggcgcaaactacggcaataaaacctggcgcgac
tatctcggcaaccgtgatgagcgcgtggtcactgacgagaacggcgaagcgacattttac
tgcaacggcggcagcgtcagcgtatgggtaattgaagaggcaatatag
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