Citrobacter rodentium: ROD_20311
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Entry
ROD_20311 CDS
T01145
Symbol
rcsA
Name
(GenBank) colanic acid capsullar biosynthesis activation protein A
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
cro
Citrobacter rodentium
Pathway
cro02020
Two-component system
cro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ROD_20311 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROD_20311 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_20311 (rcsA)
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ROD_20311 (rcsA)
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Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CBG88783
UniProt:
D2TNT9
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Position
2135556..2136179
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AA seq
207 aa
AA seq
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MSTIIMDLCSYTRLGLTGYLVSRGVKKREINDIETVEELDIACQTHRPSVVFINEDCFIH
DPNDSQHIKQIINQHPNTLFIVFMAIANVHFDEYLLVRKKLLISSKSIKPQSLDDLLGDI
LKKEANTASIINLPTLSLSRTESSMLRMWMEGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLADNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgcagttacacccggctaggtttaaccgggtatctg
gtcagcagaggggtgaagaaaagggaaatcaacgacatcgagaccgttgaggaactcgat
atcgcttgtcaaacgcaccggccttctgtggtgtttattaatgaggactgttttatccat
gacccaaacgacagtcaacatataaagcaaatcattaatcagcatcccaatacgttattt
attgtttttatggcaattgccaacgttcattttgacgaatacttattggtcagaaaaaaa
ctgttgatcagttctaaatcaataaaaccacaatcactggacgatctgcttggcgatatt
ctgaaaaaagaggccaatacggccagcataataaatttaccgacgctctctttaagccga
acggaatccagcatgttacgcatgtggatggaaggccagggtacgattcaaatttcggat
caaatgaacatcaaagcgaaaacggtgtcatcccacaagggaaatataaaacgcaagatc
aagacgcataacaaacaggttatctatcatgtcgtcaggctggcggataatgtaaccaac
ggcatatttgttaacatgcgctga
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