Citrobacter rodentium: ROD_20391
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Entry
ROD_20391 CDS
T01145
Symbol
vsr
Name
(GenBank) patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_20391 (vsr)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ROD_20391 (vsr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
TraO
Motif
Other DBs
NCBI-ProteinID:
CBG88791
UniProt:
D2TNU7
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All DBs
Position
complement(2141953..2142420)
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AA seq
155 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLAGLLTEQGINFLVQDASLPGRPDFVIDDYRCV
IFTHGCFWHHHHCYLFKVPATRTEFWLQKIGKNVERDHRDIARLQTLGWRVMIVWECALR
GREKLSDAALTERLEEWICGGGVSAQIDTQGMHLL
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtggcggacgttcacgataaggcgacgcgcagtaaaaatatgcgggccatcgccacccgc
gacaccgctatcgaaaagcggctggccggtttgctgacggaacaggggataaacttcctc
gtgcaggacgcatcgcttcccggccgccctgatttcgttattgatgactatcgctgcgtg
atttttactcacggctgcttctggcatcaccaccactgttatttgttcaaagttccggcg
acgcggaccgaattctggcttcagaaaatcggcaaaaacgtcgagcgcgaccaccgcgat
attgcgcgcttgcagacactcggctggcgggtaatgattgtctgggagtgcgccctgcgc
gggcgggaaaagctcagcgacgcggcgctgacggaacgtctggaagagtggatctgcggg
ggcggcgtctccgcgcagatcgacacgcagggcatgcacctactgtag
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