Citrobacter rodentium: ROD_21891
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Entry
ROD_21891 CDS
T01145
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
cro
Citrobacter rodentium
Pathway
cro00051
Fructose and mannose metabolism
cro00541
Biosynthesis of various nucleotide sugars
cro01100
Metabolic pathways
cro01250
Biosynthesis of nucleotide sugars
Module
cro_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
ROD_21891 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ROD_21891 (gmd)
Enzymes [BR:
cro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
ROD_21891 (gmd)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Glyco_transf_4
adh_short
3Beta_HSD
NmrA
Motif
Other DBs
NCBI-ProteinID:
CBG88938
UniProt:
D2TQK6
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All DBs
Position
complement(2287700..2288821)
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AA seq
373 aa
AA seq
DB search
MSKVALITGVTGQDGSYLAELLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTSNPKFHL
HYGDLTDSSNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIYAC
NGILFNHESPRRGETFVTRKITRGIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWMM
LQQDQPEDFVIATGVQYSVRQFVEMTAAQLGIKLRFEGEGVNEKGIVVSVTGHDAPGVKP
GDVIVAVDPRYFRPAEVETLLGDPGKAHAKLGWKPEITLQEMVSEMVAKDLEAAKKHSLL
KSHGYEVAIALES
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtcgctctcatcaccggcgttaccgggcaggatggttcttacctggcggaa
ctgctgctggagaaaggttacgaagtacacggcattaagcgtcgcgcgtcgtcttttaat
accgaacgcgtcgatcatatctatcaggatccgcataccagcaacccgaaattccatctg
cactacggcgatctgacggactcttccaacctgacccgcatcctgcaggaagttcagccg
gatgaagtgtacaacctcggcgcgatgagccacgttgccgtctcctttgagtcgccggaa
tacaccgccgacgtggacgcgatgggcaccctgcgtctgctggaggcgattcgcttcctc
ggtctggaaaagaaaacccgtttctatcaggcgtccacctccgagctgtacggtctggtg
caggagatcccgcagaaagagaccacgccgttctacccgcgttcgccgtatgccgtggcc
aaactgtacgcctactggatcaccgttaactaccgtgaatcttatggcatctacgcctgc
aacggcattctgttcaaccacgaatcgccgcgccgtggcgaaaccttcgttacccgcaaa
atcacccgcggcatcgccaacatcgcccaggggctggagtcctgcctgtacctcggcaac
atggattcgctgcgtgactggggccatgcgaaggattacgtcaggatgcagtggatgatg
ctgcaacaggatcagccggaagatttcgttatcgccaccggcgtgcagtattccgtgcgt
cagttcgttgaaatgaccgccgcgcagctgggcatcaaactgcgctttgaaggcgagggc
gtcaatgagaaaggcattgtggtttccgtcaccggccatgacgcgccgggcgtgaagccg
ggcgatgtgattgtcgccgtcgatccgcgttatttccgtcctgcggaagtggaaaccctg
ctgggcgacccgggtaaagcgcacgcgaagctgggctggaaaccggaaattaccctccag
gagatggtttcggaaatggtcgccaaagatctggaagcggcgaagaaacactccctgctg
aaatcgcacggctacgaggttgccatcgcgctggagtcctga
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