Citrobacter rodentium: ROD_21931
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Entry
ROD_21931 CDS
T01145
Symbol
wcaC
Name
(GenBank) putative glycosyl transferase
KO
K13684
putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
Organism
cro
Citrobacter rodentium
Pathway
cro00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
ROD_21931 (wcaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cro01003
]
ROD_21931 (wcaC)
Glycosyltransferases [BR:
cro01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ROD_21931 (wcaC)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
CBG88942
UniProt:
D2TQL0
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All DBs
Position
complement(2291366..2292583)
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AA seq
405 aa
AA seq
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MNILQFNVRLAEGGAAGVALDLHQRALQKGLASRFVYGYGKGGKKSVSHQRYPHVIKQTP
RLTSVANIALFRLFNRDLFGNLNTLYRTVTRTPGPLVLHFHVLHSYWLNLAGVVAFCEKV
KNHRPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCRKCPTLSNYPPVKVDRAHALVDGK
RQLFRDMLALGCQFISPSQHVADAFNSLYGAGRCRIINNGIDVATEAILAELTPVSATAG
KPKIAIVAHDLRYDGKTSQRLVRQMMALGEKIELHTFGKFSPFDGANVVNHGFETDKRKL
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSEAAQEVLHKSGGKTFAESDVLR
LVQLSKADIAQAVFGASLEAFRERSRAAYSGQQMLEEYVSFYQNL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctgcaatttaatgtgcgactggcggaaggcggcgcggctggggtggcattg
gatctgcaccagcgcgcgctgcaaaaagggctggcctcacgttttgtttatggctacggc
aaaggcggcaagaaaagcgtcagccatcagcgttatccgcacgtcattaaacagacgccg
cgcctgacgtcggtggcgaatatcgcgctatttcgcctgtttaatcgcgatctgttcggc
aatctgaatacgctttaccgcaccgtcacccgcacgccgggaccgctggtgctgcatttc
cacgttctgcacagctactggctgaatctggccggggtagtggcgttttgcgaaaaggtg
aaaaaccacaggccggacgtcaccctggtgtggaccctgcacgaccactggagcgtcacc
gggcgctgtgcctttaccgacggctgcgagggctggaagacgggctgccggaaatgcccg
acgctgagcaattacccgccggtgaaggtcgatcgcgcccatgcgctggttgacggcaag
cgccagcttttccgcgacatgctggccctcggctgccagtttatctcaccgagccagcac
gtagccgacgcttttaacagcctgtacggggcagggcgctgccggatcattaataacggc
attgacgtggcgaccgaagcgattcttgccgaattgacccccgtcagcgccactgcgggt
aaaccgaaaatcgccattgtcgcgcacgacctgcgctacgacggtaaaaccagccagcgg
ctggtgcgccagatgatggcgttgggcgaaaagattgaactgcacaccttcggcaaattc
tcgccgtttgacggcgctaacgtggtcaaccacgggtttgaaaccgacaagcgtaagctg
atgagcgccctgaaccagatggatgcgctggtgttcagctcgcgggtggacaactatccg
ctgattttatgcgaagcgctgtcgattggcgtgccggttatcgccacccatagcgaggcg
gcgcaggaagtgctgcataaatcgggcggcaaaacgtttgccgaaagtgacgttctgcgt
ttggtgcagctcagcaaagccgatattgcgcaggcggttttcggcgcctcgcttgaggct
tttcgcgaacgcagccgcgcggcatacagcggacaacagatgctggaggagtatgtctcg
ttctatcagaatctgtag
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