Citrobacter rodentium: ROD_22041
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Entry
ROD_22041 CDS
T01145
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cro
Citrobacter rodentium
Pathway
cro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROD_22041 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_22041 (alkA)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ROD_22041 (alkA)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ROD_22041 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CBG88953
UniProt:
D2TQM1
LinkDB
All DBs
Position
complement(2306808..2307677)
Genome browser
AA seq
289 aa
AA seq
DB search
MFTLSWQPPYDWSWMLGFLAARAVSGIETVDEMRYTRSLASGKQRGLITMVPDERTHTLR
VSLTPGLLPVAGICLEKIERLFDLRCEPALITDALGELGAARPGLRLPGSVDTFEQGVRA
ILGQLVSVAMAAKLTAKVVQRYGEPLAEAPGYLCFPTPEKIASADPQELKALGMPLRRAG
ALIYLARAALDGTFTAHAPADIESGVRALLAFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTDGWQPSVDGEVAGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgagctggcagccgccttacgactggtcgtggatgttgggatttcttgcc
gcccgtgcggtgagcgggatcgaaacggtggatgagatgcgctatacgcgcagcctggcc
tctggcaagcaacgcgggcttatcaccatggtgcccgatgaacggacacatacgctgagg
gtcagcttaacgccgggcctgttgccggtcgccgggatttgcctggaaaaaatagagcgg
ttgtttgacctgcgctgtgaaccggcgcttatcaccgacgctctcggcgagctgggggcg
gcgcgtccggggctgcgtctgccgggatcggtggatacgtttgagcagggcgtgcgggcg
atcctcggacagctggtcagcgtggcgatggcggcaaagctgacggcgaaagtggttcag
cgctatggtgagccgctggccgaagcgccgggctatctctgttttcccacccctgaaaaa
attgcctctgccgacccgcaggaactgaaagcgctgggaatgccgctcagacgcgccggg
gcgctgatttacctggcgcgcgccgcgctggacgggacctttaccgctcatgcccctgcg
gatatcgagtcgggagtcagggcgttgctggcgtttccggggatcgggcgctggacggcg
aactatttcgccctgcgcggctggcaggccaaagatatctttttaccggatgattacctg
atcaaacagcgctttccggggatgacgcccgcgcagatccgccgctatgcggagcgctgg
aagccctggcgatcctatgcgctgctgcacatctggtacaccgacggctggcagccgtca
gttgatggcgaagtagctggtattcagtag
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