Citrobacter rodentium: ROD_22921
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Entry
ROD_22921 CDS
T01145
Name
(GenBank) conserved hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
cro
Citrobacter rodentium
Pathway
cro00240
Pyrimidine metabolism
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
ROD_22921
Enzymes [BR:
cro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
ROD_22921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
CBG89040
UniProt:
D2TRJ3
LinkDB
All DBs
Position
complement(2406978..2407913)
Genome browser
AA seq
311 aa
AA seq
DB search
MSELTLSPQLFHISPEVQEALNNNQPVVALESTIISHGMPFPQNAQTAIEVEETIRQHGA
VPATIAIINGVMKVGLSKDEIELLGREGHNVAKVSRRDLPFVVAAGKNGATTVASTMIIA
ALAGIKVFATGGIGGVHRGAERTFDISADLQELAHTSVAVVCAGAKSILDLGLTTEYLET
FGVPLIGYQTKALPAFFCRSSPFEVSIRLDSAQEIARAMAVKWQTGLNGGLVVANPIPQA
YAMAEEEINAAIDQAVREAEEQGVVGKESTPFLLARVAELTGGDSLKSNIQLVFNNAVLA
CEIAKEYQRLV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattaacgctttcaccgcaactattccatatttctccagaagtacaggaagct
ttaaataataaccagcctgtggtggcgctggagtcgacgataatttctcacggtatgcct
ttcccacaaaatgcgcaaacggcaatcgaagttgaagaaactattcgtcagcatggcgcg
gttccggcaactatcgccattattaacggcgtgatgaaagtaggcctgagcaaagacgaa
attgaattattaggacgcgaagggcataacgtcgcgaaggtgagccgccgtgatttaccg
tttgtggtggccgccggaaaaaatggcgcaacgaccgtcgcatcgacaatgattattgcc
gcgctggccggaattaaagtctttgctaccggcggaattggcggcgtacatcgtggcgct
gaacgcacgtttgatatttccgccgatttacaggagctggcgcataccagtgtggcggtg
gtttgcgcgggtgcgaaatccattctcgatctcggtttaaccaccgaatatttagaaacc
ttcggcgtgccgttaattggctatcagaccaaagcgctgccggcatttttctgccgtagc
agcccgtttgaggtcagtattcgtctcgacagcgcgcaggagattgcccgggcgatggcg
gtgaagtggcagaccggtctgaacggcggtctggtggtggcgaatcccattccgcaagcg
tatgcgatggcggaagaagaaatcaacgccgctattgaccaggcggtcagggaagccgaa
gagcagggcgtggtgggtaaagagagtacgccgttcctgctggcgcgcgtggcggagctg
acgggcggcgacagcctgaagtcaaacatccagctggtgttcaacaatgccgtactggcc
tgcgagattgcgaaagagtaccagcgtctcgtctga
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