Citrobacter rodentium: ROD_23531
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Entry
ROD_23531 CDS
T01145
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cro03032
]
ROD_23531 (gyrA)
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_23531 (gyrA)
Enzymes [BR:
cro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ROD_23531 (gyrA)
DNA replication proteins [BR:
cro03032
]
Prokaryotic type
DNA Topoisomerases
ROD_23531 (gyrA)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ROD_23531 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CBG89099
UniProt:
D2TSD3
LinkDB
All DBs
Position
complement(2473505..2476141)
Genome browser
AA seq
878 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARPWDLGNV
AAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREELELIRDQFGDARRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAMGRTATG
VRGIKLAGEDKVVSLIIPRGEGAILTVTQNGYGKRTAAEEYPTKSRATQGVISIKVTERN
GSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSVAEGEDDIAPEAETDDDAADDADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaacattgaggaagagctgaagagctcc
tatctggattacgcgatgtcggtcattgttggccgtgcgctgccggatgtccgagatggc
ctgaagccggtacaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaat
aaagcctataaaaaatctgcccgtgtcgttggtgacgtaatcggtaaataccatccccac
ggcgattccgcggtgtatgacaccattgtacgtatggctcagccgttttcgctgcgctat
atgctggtggatggtcagggtaacttcggttccatcgacggcgactctgctgcggcgatg
cgttatacggaaatccgtctggcgaagattgcccatgagctgatggccgatctggaaaaa
gagacggttgatttcgttgataactatgacggcacggagaaaatccctgacgttatgcca
acgaaaatccctaacctgctggtgaacggttcgtccggtatcgcagtaggtatggcgacc
aacattccgccgcacaacctcacggaagtgatcaacggctgcctggcctatatcgacgat
gaagacatcagcattgaagggctgatggagcatatccctggcccggacttcccgacggcg
gcaattatcaacggtcgccgcggcattgaagaagcctaccgtaccggtcgcggtaaagtg
tacattcgcgcgcgcgcggaagtggaagcggacgcgaaaaccggtcgtgaaaccattatc
gtgcacgaaatcccgtatcaggtgaacaaagcgcgcctgatcgagaaaatcgctgagctg
gtaaaagacaaacgcgttgaaggtatcagcgcgctgcgtgacgaatctgacaaagacggg
atgcgtattgtcattgaggtcaaacgcgacgcggtgggggaagtggtgcttaacaacctt
tactcccagacgcagctgcaggtctccttcggcatcaacatggtggcgttgcaccacggc
cagccgaagatcatgaacctgaaagacattatttcagcgtttgtgcgtcaccgccgtgaa
gtggtgacccgccgtaccattttcgaactgcgtaaagcccgcgaccgcgcgcatatcctt
gaagcgctggccattgccctcgccaacattgacccgatcatcgagctgattcgccgcgcg
ccgacgccggcggaagcgaaagcggcgctgatcgcgcgtccgtgggatctgggcaacgtg
gcggcgatgctggaacgcgccggcgacgacgccgcgcgtccggagtggctggagccggaa
ttcggtgtgcgcgacggccagtattatctgaccgagcagcaggcccaggcgattctggat
ctgcgtttgcagaagctgaccggccttgagcatgaaaaactgctcgacgagtacaaagag
ctgctggagcagattgccgaactgctgcatatcctgggcagcgccgatcgtctgatggaa
gtgattcgcgaagagctggagctgatccgcgatcagttcggcgatgcgcgccgcactgaa
atcacagccaacagcgcggacatcaacatcgaagatctgatcaaccaggaagatgtggtc
gtcaccctgtctcaccagggctacgtcaagtatcagccgttgaccgactacgaagcccag
cgccgtggcgggaaaggcaaatccgccgcgcgtattaaagaagaagactttatcgaccgc
ctgctggtggccaacacccatgacaccatcctctgcttctccagccggggccgtctgtac
tggatgaaggtgtatcagctgccggaagcgagccgcggcgcgcgtggccgtccgatcgtc
aacctgctgccgctggaagccgacgaacgtattaccgccattctgccggtacgcgagtac
gaagagggcgtcaacgtctttatggcgaccgccagcggtacggtgaaaaagaccgcgctg
accgagttcagccgtccgcgttcggccggtatcatcgcggtgaacctgaacgaaggcgac
gaactgatcggcgtggatctgacctccggtagtgacgaagtgatgctgttctccgccgcc
ggcaaagtggtgcgctttaaagaagacgccgtccgtgcgatgggtcgtaccgcgaccggc
gtgcgcggcatcaagctggcgggcgaagacaaagtggtttcgctgattattccacgcggc
gaaggcgcaattctgaccgtgacgcaaaacggctatggtaagcgtaccgcggcggaagag
tatccgaccaaatcccgtgcgacgcagggcgttatctctatcaaggtcaccgagcgcaac
ggttccgttgtcggcgcggtgcaggtagacgactgcgaccagatcatgatgatcaccgat
gccggtacgctggtgcgcacgcgcgtgtcggaaatcagcgtggtgggccgtaacactcag
ggcgtgatcctcatccgtaccgcggaagatgaaaacgtcgtgggcctgcagcgtgttgct
gagccggtggatgatgaagagcttgactccatcgacggcagcgtcgcggaaggggaggat
gatatcgccccggaagcggaaaccgacgacgatgcagcggatgacgccgacgagtaa
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