Citrobacter rodentium: ROD_24931
Help
Entry
ROD_24931 CDS
T01145
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cro
Citrobacter rodentium
Pathway
cro00260
Glycine, serine and threonine metabolism
cro00460
Cyanoamino acid metabolism
cro00630
Glyoxylate and dicarboxylate metabolism
cro00670
One carbon pool by folate
cro00680
Methane metabolism
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
cro01120
Microbial metabolism in diverse environments
cro01200
Carbon metabolism
cro01230
Biosynthesis of amino acids
cro01240
Biosynthesis of cofactors
cro04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROD_24931 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ROD_24931 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROD_24931 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ROD_24931 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ROD_24931 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ROD_24931 (glyA)
Enzymes [BR:
cro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ROD_24931 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CBG89236
UniProt:
D2TU04
LinkDB
All DBs
Position
complement(2626802..2628061)
Genome browser
AA seq
419 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGHIDYADLEKQAQAQTHKPKMIIGGFSAYS
GVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGL
ILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAM
VEVFLARGYNVVSGGTDNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFV
TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEAVIERIKGKVLDICARFPVYA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgaaaactacaccagc
ccgcgcgtgatgcaggcgcagggatctcagctgactaacaaatacgctgaaggctatccg
ggcaagcgctactacggcggttgtgaatatgtcgatatcgttgagcaactggcgatcgat
cgcgcgaaagcgctgttcggcgctgactacgctaacgtccagccgcactccggctctcag
gctaactttgctgtttacaccgctctgctggagccgggcgataccgttctcggtatgaac
ctcgcgcacggcggccatctgactcacggttccccggttaacttctccggcaaactgtat
aacatcgttccttacggcatcgatgagagcggtcatattgactatgcggatctggaaaag
caggcgcaggcgcagacgcataaaccgaaaatgattatcggcggcttctccgcttactcc
ggcgtggttgactgggcgaagatgcgtgaaatcgctgacagcatcggcgcttatctgttt
gtggatatggcccacgtcgccggtctggttgccgcaggcgtctacccgaacccggttccg
cacgcgcacgttgtgaccaccaccacccacaaaaccctggcgggtccgcgcggcggcctg
atcctggcgaagggcggcagcgaagagctgtacaagaaactgaactccgcggtcttccct
ggcggccagggcggcccgctgatgcacgttatcgccggtaaagcggtggcgctgaaagaa
gcgatggagccagagttcaaaacctaccagcagcaggttgccaaaaacgctaaagcgatg
gttgaagtattcctcgcccgcggctacaacgtggtgtccggcggtactgataaccacctg
ttcctgctggatctggttgataagaacctgaccggtaaagaagccgatgccgcgctgggc
cgcgccaacatcaccgtgaacaaaaacagcgtgccgaacgatccgaagagcccgttcgtt
acctccggtatccgtatcggttcaccggcagtaacgcgccgcggctttaaagaagcggaa
gtgaaagagctggcgggctggatgtgtgatgtgctggacaatatcaatgatgaagcggta
attgagcgtatcaaaggtaaagtgctggacatctgcgcgcgcttcccggtttacgcgtaa
DBGET
integrated database retrieval system