Citrobacter rodentium: ROD_25721
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Entry
ROD_25721 CDS
T01145
Name
(GenBank) putative ATP-binding protein of T1SS
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
cro
Citrobacter rodentium
Pathway
cro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROD_25721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cro02000
]
ROD_25721
02044 Secretion system [BR:
cro02044
]
ROD_25721
Transporters [BR:
cro02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ROD_25721
Secretion system [BR:
cro02044
]
Type I secretion system
Adhesin protein transporter
ROD_25721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
ABC_ATPase
AAA_29
Peptidase_C39
AAA_23
Dynamin_N
MMR_HSR1
RsgA_GTPase
NACHT
AAA_25
Phage_tudor
PIG-F
Motif
Other DBs
NCBI-ProteinID:
CBG89315
UniProt:
D2TUP6
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All DBs
Position
2727056..2728822
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AA seq
588 aa
AA seq
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MSHADIPANEPISAPALANWARAMNHIAAHYRIACSPGALQASAPWFKDKPMTQALTQLA
RQAGLSFQPLTPTEQSLSRWKLPVVIQLQDGDLVLVEQFDGDNQLDVCFVNGELQRNRIT
LSELLPTIRFIIALRPISAMKDSRVDAYVSRFRADWLKSLVLKDLRPYGPVMLAALLMIL
PGLLLQKKLAELANQSAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITAES
GLRTRELSQGLINWGVTVQGLVYAAVVMFGAPLVIEGTLTTGSVVAASMLASRMIAPMGN
LCGVLARWQQVKAAKKGLDSIMELPVETQRDETLVHQDIFHGHYLFENAQFRYHSEDQRV
PLRINRLEIAAGERIAVLGRNGAGKSTLLQALAGGVDLVEGDARLDNISLPHIDMADLRR
NVGLLSQNARLFYGTLRENLTLGAPHASDNEIFAVLDICGAANFVKRLPKGLDHPIMEGG
TGLSGGQRQSIMLARMLLRAPNIVLLDEPTASLDEHAEREFIQRLGQWLGNRTLIVATHR
VPVLELVERVIVLKEGQLVMDAPKAQALGQSRMAAQNVREWKNENQSA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgccgacattcctgccaatgaaccgattagcgccccggcgctggccaactgg
gcgcgggcgatgaaccacatcgccgcccattaccgtatcgcctgttctcccggcgcgcta
caggccagcgcgccgtggtttaaagataaaccgatgacccaggcgctcacccagcttgcc
cgccaggccggcctctcttttcagccgctgacgcctacggagcagtcactcagccgctgg
aaactgccggtggtgattcagctgcaggatggcgatctggtgctggtggagcagtttgat
ggcgataaccagcttgatgtctgctttgttaacggcgagctgcagcgcaaccggattacc
ctcagcgaactgttgccgaccattcgttttattatcgcgctgcgcccgatctcggcgatg
aaagacagccgggtggacgcctacgtttcgcgcttcagagccgactggctgaaaagtctg
gtgctgaaggatctgcgcccctacggtccggtcatgctggcggcgctgctgatgatcctc
cccggcctgctgctgcaaaagaagctggcggaactggcgaaccagtcagcgcatgaggcc
acgctgcgtaacgcggtgctggtggagagcgtacaggggctggaggatattaagctgatg
caggcggagaatcgctttctgcaacagtggaacagctatatccgcatcaccgccgagtcc
ggtctgcgcacccgcgagctgtcgcaggggttgatcaactggggagtgacggtccagggg
ctggtgtacgcggcggtggtgatgttcggcgcgccgctggtgattgaaggcacgctgacc
accggttcggtagtggccgcctccatgctcgcctcgaggatgatcgccccgatgggcaac
ctgtgcggcgtgctggcgcgctggcagcaggtaaaagcggctaaaaaagggctcgacagc
attatggagctgcctgtcgagactcagcgcgacgagacgctggtgcaccaggacattttt
cacggccactatctgtttgagaacgctcagttccgctatcacagtgaagatcagcgggtg
ccgctgcgcattaaccgactggagattgccgccggtgagcgcatcgcggtcctggggcgc
aacggcgcgggtaagtcgacgctattgcaggcgctggcgggaggggtggatttggtggaa
ggcgatgcccggctcgacaacatcagcctgccgcacattgatatggccgatttacgtcgc
aacgtcggccttctcagccagaacgcgcgcctgttttacggcaccctgcgcgagaacctg
acgcttggcgcgccgcacgccagcgataacgagatttttgccgtgctggacatctgcggt
gcggcgaacttcgtaaagcgtctgcccaaagggttagatcatccgattatggaaggggga
accgggctgtccggcggtcagcgccagtccatcatgctggcccgtatgctgttgcgcgcg
cccaatatcgtcctgctggacgaacctaccgcctcgctggacgagcacgctgagcgtgaa
tttattcagcggctgggccagtggcttggcaaccgcacgctgattgtcgccacccatcgc
gtgccggtgctggagctggtggagcgggtgattgtgcttaaagagggtcaactggttatg
gatgcgccgaaagcgcaggcgctggggcagagtcgtatggccgcacagaatgtacgggag
tggaaaaatgaaaaccagtcagcctga
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