Citrobacter rodentium: ROD_27301
Help
Entry
ROD_27301 CDS
T01145
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cro03016
]
ROD_27301 (truA)
Enzymes [BR:
cro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ROD_27301 (truA)
Transfer RNA biogenesis [BR:
cro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ROD_27301 (truA)
Prokaryotic type
ROD_27301 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CBG89473
UniProt:
D2THP2
LinkDB
All DBs
Position
complement(2881388..2882197)
Genome browser
AA seq
269 aa
AA seq
DB search
MSDQQQPVYKIALGVEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDA
GVHGTGQVVHFETSALRKDAAWTLGVNANLPGDIAVRWVKAVPEDFHARFSATARRYRYI
IYNHRLRPAVLAKGVTHYYEPLDAERMHRAAQCLIGENDFTSFRAVQCQSRTPWRNVMHI
NVSRHGAYVVVDIKANAFVHHMVRNIVGSLMEVGAHHQPESWIAELLAAKDRTLAAATAK
AEGLYLVAVDYPDRFDLPRPPMGPLFLAD
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccagcagcagcccgtctataaaattgcgctcggcgttgagtatgacggcagc
aaatattatggctggcagcgtcagaacgaagtgcgcagcgtacaggagaagctggaaaaa
gcgctctcccaggtcgccaacgagccgattaccgtcttttgcgccgggcggaccgacgcg
ggcgttcacggcaccgggcaggtggtgcattttgaaaccagcgcgctgcgtaaggacgcc
gcctggacgttaggcgtaaatgcgaatttacctggtgacattgcggtgcggtgggtgaaa
gctgtaccggaagattttcacgcccggtttagcgccacggctcgccgttatcgctacatc
atctacaatcatcggttgcgtccggcggttttagcaaagggcgtcacgcactactacgag
ccgctggatgcggagcggatgcaccgcgcggcgcagtgcctgattggcgagaacgacttt
acctcgtttcgcgccgtgcagtgccagtcgcgcacgccgtggcgcaatgtgatgcatatt
aatgtctcacgccacggcgcttacgtggtggtcgatatcaaagcgaatgcctttgtacat
catatggtcaggaatatcgtcggtagcctgatggaagtgggcgcccaccaccagccggag
agctggatagcagagctgttagcggcaaaggacagaacgcttgcagcggcaacggcgaaa
gcggaagggctgtacctggtcgcggtggattatcccgatcggttcgaccttcccagaccg
cctatggggccgctgtttctggcggactaa
DBGET
integrated database retrieval system
