Citrobacter rodentium: ROD_28421
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Entry
ROD_28421 CDS
T01145
Name
(GenBank) putative transcriptional regulator
KO
K03435
LacI family transcriptional regulator, fructose operon transcriptional repressor
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_28421
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ROD_28421
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
LacI
GerE
Sigma70_r4_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CBG89582
UniProt:
D2TIM0
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All DBs
Position
complement(3004977..3005975)
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AA seq
332 aa
AA seq
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MAKTVEQIADDLNLSVTTVRLVLNGKAEQYRISLKTQTRINDYVERYGYVINHSARSLKL
NKTYTLGLIVPNLSNVFFATLAEKLEQRCRRSGYQLMISCTYDDVDYENKLTKALIARNV
DGLFIVPSTLENQQHHLRQVRKPMVLLDRDFKYTDNALVESHNLSGGEQLTRHLLDAQKL
PVWFLVGDTGLPSISDRLAGYLSALSQQGITHREWVREGPVNTPEGGYEIMQKLMDEQGC
PQAFIASSLPVLEGAVRAIRDRVGVVPPEIDIGTFDEHPMLGFLSNNVWSMQQDENAWAE
KAFDMMLSAIEGQPVKETVKVDMKLITRLRQQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctaagacagtagaacagatagccgacgatctcaatttatcggttacgaccgtgaga
ctggtgctgaatggaaaagctgaacagtatcgaatcagcctcaaaacacaaacgcggata
aatgactatgtcgagcgctatggctatgtgatcaaccactccgcccgcagcctgaagctg
aataaaacctataccctggggttaattgttcccaacctttccaacgttttcttcgccacg
ctggcggaaaagcttgagcaacgctgtcgccgctccggctaccagctgatgatcagctgc
acctacgatgacgtggattatgagaataaattaaccaaagcgttaatcgcccgtaacgtt
gacggcctctttatcgttccttcgacgttagagaatcagcagcaccatttacgtcaggtc
aggaagccaatggtgctgctggaccgcgattttaaatacaccgataacgcgctggtggag
agtcataacctgtccggcggcgagcagttaacccgtcatttactggatgcgcaaaagctg
ccggtgtggtttctggtcggcgacaccggtttacccagcatcagcgatcgtctggctggt
tatctcagcgcgttaagccaacagggcattacgcatcgcgagtgggtgcgcgaagggccg
gtcaacaccccggaagggggatacgagattatgcaaaagcttatggatgaacagggatgc
ccgcaggcgtttatcgcctcgtcgttgccggtgctggaaggggcggtgagagccatccgc
gatcgcgtcggcgtggtgccgccggagatcgatattggcacctttgacgaacatccgatg
ctgggattcctgtcgaataacgtctggtcaatgcagcaggacgagaacgcctgggcggag
aaggctttcgacatgatgctcagcgccatagaaggccagccggtgaaagagaccgtaaaa
gtcgacatgaaattaatcacgcgcttacgacaacaataa
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