Citrobacter rodentium: ROD_28571
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Entry
ROD_28571 CDS
T01145
Name
(GenBank) conserved hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cro03016
]
ROD_28571
Transfer RNA biogenesis [BR:
cro03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ROD_28571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
DAO
3HCDH_N
NAD_binding_7
ELFV_dehydrog
ApbA
TrkA_N
NT5C
Motif
Other DBs
NCBI-ProteinID:
CBG89597
UniProt:
D2TIN5
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All DBs
Position
complement(3020478..3021284)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERLRQINPECRVSVVDDFVTPDNVAEYMNA
GFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQADGSVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAARQV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgtaataagtgatgcctggcgtcagcgttttggcggcacggcgcgcctgtat
ggtgaaaaagcgctgcagctgtttgccgacgcgcatatctgcgtggtcgggattggcggc
gtcggttcgtgggcggcggaggcgctggcgcgaaccggtatcggcgcgattacccttatt
gatatggatgatgtgtgcgtcaccaacaccaaccgccagatccacgccctgcgcgacaac
gtcgggctggcgaaagcggaggtgatggccgaacgccttcgccagatcaacccggaatgc
cgggtcagcgtagtcgatgactttgtgacgccggataacgtcgcggaatatatgaacgcc
ggattcagctatgtgattgacgccattgacagcgtgcgcccgaaggcggcgctgattgca
tactgccgtcgcaacaaaatcccgctggtgaccaccggcggcgcgggcggccagatcgat
cctactcaaattcaggtgacggatctggcgaaaaccattcaggatccgctggcggcgaag
ctgcgcgagcggctgaaaagtgattttggcgtggtgaaaaacagcaaaggcaagctgggc
gtggactgcgtgttctccaccgaggcgctggtttatccccaggccgacggcagcgtctgc
gccatgaaagcgacggcggaagggccgaaacggatggactgcgcgtcgggcttcggcgca
gcgacgatggtcaccgccacctttggctttgtggcggtttctcacgcactgaaaaagatg
atggcgaaggcggcgcgccaggtttag
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