Citrobacter rodentium: ROD_28931
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Entry
ROD_28931 CDS
T01145
Symbol
ogl
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
cro
Citrobacter rodentium
Pathway
cro00040
Pentose and glucuronate interconversions
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ROD_28931 (ogl)
Enzymes [BR:
cro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
ROD_28931 (ogl)
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
CBG89632
UniProt:
D2TJJ5
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Position
3065430..3066605
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AA seq
391 aa
AA seq
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MAKGMRVRLNYEVSRDPDTGVEITRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDIAKAEAVQLTEGAGDNTFGGFLSPDDSALYYVKNDRTLYEVNLHTLAEREVYRV
PEEWVGYGTWVANSDCTKLVGIEIAKSDWTPLNDWQIFHDFFHKGPHCRLLRVDLKTGDS
AVIHEEKIWLGHPIYRPFDDHTVAFCHEGPHDLIDARMWLVNEDGSNIRKVKDHAEGESC
THEFWVPDGSALVYVSYLKGQQGRTISRYNPDSGMNEDIMPMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTGGYTIDNDPYLYGFDVAKKGYFRIARHDTSWATVANSRQVTHPHPSFTP
DDRAVLFSSDKDGKPAIYIAKLPEQPELLQL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcatgcgggtcaggctgaactatgaggtcagccgcgatccggatacgggc
gtggaaattacgcgtctgaccccaccggaagtaacgtgtcaccgaaattatttttatcag
aaatgtttctttaatgacggtagccatctgctgtttgccggggagtttgacggccactgg
aactactatttactggatatagcgaaagcagaggccgttcagctgacggaaggcgcaggc
gacaatacctttggcggctttttatctcctgacgacagcgctctttactacgtaaagaac
gatcgcacgctgtatgaagttaatctgcacaccctggcggagcgggaagtgtaccgcgta
ccggaggaatgggtaggttatggcacctgggtggcaaacagcgactgcacgaagctggtc
ggtattgagattgccaaaagcgactggacgccgctcaacgactggcaaatcttccacgac
tttttccataaaggccctcactgccgcctgctgcgggtcgatctgaaaaccggcgacagc
gccgttatccatgaagaaaagatctggctgggccatccgatctatcgtcccttcgatgat
cataccgtggcgttctgccacgaaggtccgcacgatctgatcgacgcgcggatgtggctg
gtgaatgaagacggcagcaatattcgcaaagtgaaagatcacgccgagggcgaaagctgc
acccatgaattctgggtgccggacggctccgcgctggtatacgtctcgtatctgaaaggg
cagcagggccgcactatctcccgctataacccggacagcggcatgaatgaagatattatg
ccgatgccagcctgctcgcatctgatgagtaatttcgacggtacgctgctggtgggcgac
ggttccggcaccccggtcgatgtcaaagacaccgggggttataccatcgataacgatcct
tatttatacggttttgacgtggcgaagaaagggtatttccgcatagcccgtcacgatacc
tcatgggcgacggtcgccaacagccgtcaggttacccatccgcatccctcttttactccg
gacgatcgcgcggttctgtttagctctgataaagacggtaaacctgccatctatattgcg
aagctgccggaacaaccggaattattgcaactgtga
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