Citrobacter rodentium: ROD_30641
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Entry
ROD_30641 CDS
T01145
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cro03016
]
ROD_30641 (truD)
Enzymes [BR:
cro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ROD_30641 (truD)
Transfer RNA biogenesis [BR:
cro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ROD_30641 (truD)
Prokaryotic type
ROD_30641 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CBG89793
UniProt:
D2TLA8
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All DBs
Position
3232783..3233832
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AA seq
349 aa
AA seq
DB search
MTEFDNLTYLHGKPQSAGLLKASPEDFLVVEDLGFEPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHVREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCKVLEYVRHKRK
LRTGALKGNAFTLVLREITHRDEVESRLKAISEAGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDFNQVVDGDALQLAGRGSWFVATMEE
RAELQRRVDDKALMITASLPGCGEWGAQGEALAFEQSAIAEETALQSLLLREKVEAARRA
MLLYPQQMRWSWWDDVTVELRFWLPAGSFATSVVRELINTTGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgataatctcacttatcttcacggaaaaccgcagagcgccggtttgctg
aaagccagcccggaagattttctggtggtcgaagatttaggcttcgaaccggatggcgaa
ggcgagcatgtgctggtgcgcattcttaagaacggctgcaacacccgttttgtcgctgac
gcgctggcgaaatttctgaaaattcatgtccgtgaagtgagttttgccgggcaaaaagat
aaacatgccgtcaccgaacagtggctgtgcgcgcgcgtgccgggtaaagagatgccagac
ctgagcgcctttcagcttgaaggctgcaaagtgctggagtatgtgcgtcataaacgcaaa
ctgcgtaccggcgcgctgaagggcaatgcctttacgctggtgctgcgcgaaatcactcat
cgtgatgaggtagaatcccgcctgaaggccatcagcgaggccggggtgccgaactatttc
ggcgcgcagcgcttcggcattggcggcagtaacttacagggcgcgctgcgctgggcgcaa
agcgatgcgccggtgcgcgatcgcaataaacgtagtttttggttgtcggcggcgcgcagc
gcgttgtttaatcaaatcgtcagcgagcgtttgaaaaaaccagactttaatcaagttgtt
gacggcgatgcgctacaattagccgggcgcggaagctggtttgtggcaacgatggaagag
cgtgcggaactccagcgtcgcgtcgatgacaaagcgctgatgattacggcgtcgcttccc
ggctgcggcgaatggggcgcacagggtgaagcgctggcctttgagcagtccgcgattgcg
gaggaaacggcgctgcaatcgctgctgctgcgtgaaaaagtcgaggccgcgcgccgggca
atgctgctttatccgcagcagatgcgctggagctggtgggacgacgtaaccgtcgagtta
cgtttctggctcccggcgggcagctttgcgacaagcgtagtaagggaactgatcaacaca
acgggtgattatgcgcatattgctgagtaa
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