Citrobacter rodentium: ROD_32061
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Entry
ROD_32061 CDS
T01145
Symbol
groL
Name
(GenBank) 60 Kda chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cro
Citrobacter rodentium
Pathway
cro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ROD_32061 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cro03019
]
ROD_32061 (groL)
03110 Chaperones and folding catalysts [BR:
cro03110
]
ROD_32061 (groL)
03029 Mitochondrial biogenesis [BR:
cro03029
]
ROD_32061 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cro04147
]
ROD_32061 (groL)
Enzymes [BR:
cro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ROD_32061 (groL)
Messenger RNA biogenesis [BR:
cro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ROD_32061 (groL)
Chaperones and folding catalysts [BR:
cro03110
]
Heat shock proteins
HSP60 / Chaperonin
ROD_32061 (groL)
Mitochondrial biogenesis [BR:
cro03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ROD_32061 (groL)
Exosome [BR:
cro04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ROD_32061 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ROD_32061 (groL)
Exosomal proteins of breast cancer cells
ROD_32061 (groL)
Exosomal proteins of colorectal cancer cells
ROD_32061 (groL)
Exosomal proteins of bladder cancer cells
ROD_32061 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CBG89926
UniProt:
D2TMA3
LinkDB
All DBs
Position
3380699..3382345
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPYILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgtggcgtt
aacgtactggcagatgcagtaaaagtaaccctcggtccgaaaggccgtaacgtagtgctg
gacaaatccttcggcgcaccgaccatcaccaaagatggcgtttccgtagcgcgtgaaatc
gaactggaagacaagttcgagaacatgggcgcgcagatggtgaaagaagttgcctctaaa
gcaaacgatgcggcaggcgacggcaccaccaccgcaaccgtactggctcaggcgatcatc
actgaaggtctgaaagccgttgctgcgggcatgaacccgatggatctgaaacgtggtatc
gataaagcggttactgctgcggttgaagaactgaaagcgctgtccgtaccgtgctctgac
tcgaaagcgattgctcaggtaggcaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggataaagtcggtaaagaaggcgtgatcaccgttgaagacggc
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgcggctacctg
tctccgtacttcatcaacaagccggaaactggcgctgtagaactggaaagcccgtacatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gcgaaagcaggcaaaccgctgctgatcatcgctgaagacgtggaaggcgaagcgctggcg
acgctggtggttaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcgccgggc
ttcggcgatcgtcgtaaagccatgctgcaggatatcgctaccctgaccgccggtaccgtt
atctctgaagagatcggtatggagctggaaaaagcgaccctggaagatctgggtcaggcg
aaacgcgtggtgatcaacaaagacaccactaccatcatcgatggcgtgggcgaagaagcg
gcaattcagggtcgtgtgactcagattcgtcagcagatcgaagaagccacttccgactac
gatcgtgaaaaattgcaggagcgcgtagcgaaactggcaggcggcgttgcggtaatcaaa
gttggcgcagctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagacgccctg
cacgcgacccgtgcggcggtggaagaaggcgtggttgccggcggcggcgttgcgctgatt
cgcgcagcatcgaagattgccgatctgaaaggtcagaacgaagatcagaacgtgggtatc
aaagtcgcgctgcgcgcgatggaagcgccgctgcgtcagatcgtgctgaactgcggcgaa
gaaccgtctgttgtggcgaacaccgtgaaaggcggcgacggcaactacggttacaatgcg
gcgaccgaagaatacggcaacatgatcgacatgggtatcctggacccgaccaaagtaacc
cgttctgcactgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gtgaccgacctgccgaaaggcgatgcgcctgacttaggtgctgctggtggtatgggcggc
atgggtggtatgggcggcatgatgtag
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