Citrobacter rodentium: ROD_32211
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Entry
ROD_32211 CDS
T01145
Name
(GenBank) putative membrane protein
KO
K22051
miniconductance mechanosensitive channel
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cro02000
]
ROD_32211
Transporters [BR:
cro02000
]
Other transporters
Pores ion channels [TC:
1
]
ROD_32211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Peptidase_S10
Motif
Other DBs
NCBI-ProteinID:
CBG89941
UniProt:
D2TMB8
LinkDB
All DBs
Position
complement(3397242..3400544)
Genome browser
AA seq
1100 aa
AA seq
DB search
MAWCLSLGAYAATAPDAKQLTQELEQAKAAKPAQPEAVEALQAALNSLEERKGSLERAQQ
YQQVIDNFPKMSASLRAQLANLHDEPRSVPPDLSTDALNQEILQISSQLLEKSRQAQQEQ
ERAREIADSLSQLPQQQTDARRQLNEIERRIGTATGNTPVSQAQNYSMQAESARLKALVD
ELELAQLSANNRQELARMRSELAQKQSQQLDAYLQALRNQLNSQRQREAERALESTELLA
ENSADLPPDIVAQFRVNRELSAALNQQAQRMDLVASQQRQAASQTQQVRQALTTLREQSQ
WLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDQLNKQPQLRQLHQTNG
QPLTAEQNRILEAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKEVNEATHRY
LFWTSDVRPVSFSWPIDIVQDLRRLISLDTVSQLGKASLMMLTSRETLLPLFGALILVGF
SIYSRRHFTRFLERSAARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLGYGLREAWP
YPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVTRAMRYYLMSIGLIV
PLIMALIMFDNLNDREFSGSLGRLCFILICGALALVTLSLKKAGIPLYLDKEGSGDNMVN
SMLWNMMIGAPLIAILAAAVGYLATSQALLARLETSVAIWFLLLVIYHIIRRWMLIQRRR
LAFDRAKHRRAEMLAQRARGEEEPAHSTSLEGAVDIDESEVDLDTISTQSLRLVRSILML
IALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLV
RNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALG
VGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEII
VPNKAFITEQFINWSLSDSVTRVVLTVPAPADANSEEVTQILYTAAERCTLVIDNPPPEV
FLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHEHGIDMPFPPFQMRLESLNG
KQTARTLTSAGRRSRPAGSL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcctggtgcctcagcctgggggcgtacgctgcgacggcccccgacgccaaacagctc
acccaggaactggagcaggcgaaagcggcgaaacccgcccagccggaagccgttgaggcg
cttcaggcggcgctgaactcgcttgaggagcgtaaaggctcccttgagcgcgctcagcag
taccagcaggtcatcgacaatttccccaaaatgtccgcctcgctgcgggcgcagctcgcc
aacctgcacgatgaaccgcgcagcgttccaccggatttgtccacggatgcgctgaaccag
gaaattctccagatcagcagccagctgctggagaaaagtcgtcaggcccagcaggaacag
gaacgcgcgcgcgaaatcgccgactcgctcagccagcttccgcaacagcaaaccgatgcc
cgccgccagctcaacgaaattgaacgccgcatcggcacggcaaccggcaatacgcctgtc
agccaggcgcaaaattacagtatgcaggccgaatccgcgcgtctgaaagcgctcgttgat
gaacttgagctggcgcaactctccgccaataaccgccaggaactggcgcggatgcgttcc
gaactggcgcaaaagcaaagtcagcagcttgatgcttatctgcaggcgctgcgcaatcag
ctgaacagccagcgccagcgtgaagcggaacgcgcgctggaaagcaccgaactgctggcg
gaaaacagcgctgacctgccgccggatatcgtggcacagttcagggtcaaccgcgagctg
tcagccgcgctgaaccagcaggcgcagcgcatggatctggttgcctctcagcagcgccag
gccgccagtcagacccagcaggtacgtcaggcgctgacgacgctgcgggaacagtcgcag
tggttaggctcgtcgaatctgctcggcgaagcgctgcgcgcgcaggtcgcgcgactgccg
gaaatgccaaagccgcagcagcttgataccgaaatggcgcaactgcgcgtgcagcgcctg
cgctatgaggatcagctcaataagcagccacagctgcgtcaactgcaccagaccaacggg
cagccgctcaccgcggagcagaatcgcatcctggaggcccagctacgtactcagcgcgaa
ctgttgaactcgctgctacagggcggcgacacgctgatcctcgagctgaccaagctgaaa
gtctccaacagccagcttgaagacgccttaaaagaggtgaacgaagcgacccaccgctac
ctgttctggacgtcggatgttcgccctgtttccttctcctggccgattgatatcgtgcag
gatctgcgtcgccttatctcgctcgacaccgtcagccagttaggcaaagccagcctgatg
atgttaaccagccgggaaacgctgttaccgctgtttggcgcgctgattctggtgggcttt
agcatctactcgcgccgccactttacccgctttctcgagcgctccgccgccagggtcggc
aaagtcacccaggatcacttctggctgacgctgcgcaccgtcttctggtcgatcctggtg
gcctcgccgctgccggttttatggatgacgctgggctacgggctgcgcgaagcgtggccg
tatccgctggcggtggcgataggcgatggcgtcaccgcaacggtgccgctgctgtgggtg
gtgatgatctgcgcgacctttgcccgtccgaacggcctgtttatcgctcacttcggctgg
ccgcgcgagcgggtaacgcgggcgatgcgctactatctgatgagcatcgggcttatcgta
ccgctgatcatggcgctcatcatgttcgataatctgaacgaccgggagttctccggctcg
ctgggtcgcctgtgctttattctgatctgcggcgcgctggcgctggtgacgctgagcctg
aaaaaggccggtatcccgctctatctcgataaagagggtagcggcgacaacatggttaac
agcatgctgtggaacatgatgatcggcgcgccgctgatagcgattctggctgccgcggtg
ggttatctggccacctcgcaggcgctgctggcgcggctggaaacctcggtcgctatctgg
ttcctgctgctggttatctatcatattattcgccgctggatgctgattcagcgccggagg
ctggccttcgatcgcgccaagcaccgccgcgcagagatgctggcgcaacgcgcgcgcggc
gaagaagagcccgctcattccaccagcctcgaaggcgccgtcgacattgatgaaagcgaa
gtcgatctcgacaccatcagcacccagtcgctgcggctggtgcgttccatcctgatgctg
atcgccctgctgtcggtgatcgtgctgtggtcagaaatccattccgcattcggcttcctg
gaaaatatctcgctgtgggacgttacctccacggtgcagggcgtcgaaagcctcgagccg
atcacgctgggcgccgtgctgatcgcgatcctggtgtttatcatcaccacccaactggtg
cgcaaccttcccgcgctgctggagctggcgctgttgcagcatctcgatctgacgccaggc
accggctacgccattaccaccataaccaaatatctgctgatgctgatcggcgggctggtc
ggcttctcgatgattggcattgagtggtcgaaactgcaatggctggtggcggcgctgggt
gtcggccttggctttggcttgcaggagatcttcgccaactttatctccggcctgattatc
ctgtttgaaaagccgattcgtattggcgatacggtgacgatccgcgatctgaccggcagc
gtgacaaagattaatacccgagcgaccaccatcagcgactgggaccgcaaagagattatc
gtgccgaacaaagcgtttatcaccgaacaatttattaactggtcgctctccgactcggta
acccgcgtggtgctcaccgttccggcccccgccgacgccaacagcgaggaggtgacgcaa
atcctctacacggcggcagagcgctgtacgctggtgatagacaacccgccgccggaggtc
ttcctggtcgatttacagcagggtattcagatctttgaactgcgtatctatgctgcggaa
atgggacaccggatgccgctgcgtcatgaaatccaccagctgattctggcgggcttccat
gagcacggtattgatatgccgttcccgccgttccagatgcgtctggaaagcctgaacggc
aaacaaacggcgagaacgctgacctcagccgggcgcagaagccgcccggcgggaagtttg
taa
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