Citrobacter rodentium: ROD_32821
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Entry
ROD_32821 CDS
T01145
Name
(GenBank) putative exported protein
KO
K09800
translocation and assembly module TamB
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cro02000
]
ROD_32821
Transporters [BR:
cro02000
]
Other transporters
Pores ion channels [TC:
1
]
ROD_32821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
T2SSN
Motif
Other DBs
NCBI-ProteinID:
CBG90001
UniProt:
D2TN57
LinkDB
All DBs
Position
3462780..3466559
Genome browser
AA seq
1259 aa
AA seq
DB search
MSLWKKISLGVLIFILLLLATVGFLVGTTTGLHLVFSAANRWVPGLEIGQVTGGWRDLSL
KNIRYDQPGVAVNAGEVHLAVGLECLWKSSLCVNDLSLKDINVVIDSKKMPPGEQVEEEE
ESGPLNLSTPYPVTLSRVALENINVKIDDTTVSVMDFTSGLNWQEKNLTLKPTALQGLLI
ALPKVAEVAQEEVVEPKIQNPQPDEKPLGETLQDLFSKPVLPEMTDVHLPLNLNIEEFKG
EQLRLTGDTDLTVFSLLLKVSSIDGNMKLDALDIDSSQGAVNATGTAQLANNWPVDITLN
STLNVEPLKGEKIKLKVGGALREQLEVGVNLSGPLDVNLRAQARLAEAGLPLNLEVVSEQ
ISWPFTGDRQFQADNTRLKLTGKMTDYTLSMRTAVKGQDVPPATITLDAKGNEQQINLDK
LTVAALEGKTELKALVDWRQAISWRGELTLDGINTAKEVPDWPSKLNGLIKTRGSLYGGS
WQMEVPELKLTGNVKQNKVNVNGSLKGNSYMQWTIPGLHLVLGPNSADVKGELGVKDLNL
DATIDAPGLDNALPGLGGTAKGLVKVRGTVDAPQLLADITARGLRWQELSIAQVRVDGDI
KSTDQIAGKLDVRVERISQPDVNINLVTLHAKGSEKQHELQLRIQGEPVSGQLDLAGSFD
REEMRWKGTLSNTRFRTPVGPWSQTRAIALDYRGQEQKISIGPHCWTNPNAELCVPQTID
AGAEGRAVVNLNRFDLAMLKPFMPETTQASGVFSGKADVAWDTTKEGLPQGNVTLSGRSV
KVTQTVNDAPLPLAFDTLNVSADLHDNRAELGWQIRLSNNGQLDGQVQVTDPQGRRNLGG
NVSIRNLNLAMVNPIFARGEKAAGLLNANLRLGGDVQSPQMFGQLQLNGVDIDGNFMPFD
MQPSQLAMNFNGTRSTLTGVVRTQQGEINLSGDADWSQIENWRARIAAKGSRVRITVPPM
VRLDVSPDVVFEATPSLFTLDGRVDVPWARIVVHELPESAVGVSSDEVMLNNQLQPEEPQ
TAAIPINSNLIVHVGNNVRMDAFGLRARLTGDLKVAQDKQGLGLNGQINIPEGRFHAYGQ
DLLVRKGELLFSGPPDQPILNIEAIRNPEATEDDVIAGVRVTGSADEPKAEIFSDPAMSQ
QEALSYLLRGQGLDSNQSDSAAMTSMLIGLGVAQSGQVVGKIGETFGVSNLALDTQGVGD
SSQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggaagaaaataagcctcggggtactgatttttatcctgctgttgctggcg
accgtcgggtttctggtgggcacgaccaccggtctgcatctggtgttcagcgcggctaac
cgctgggtgccggggctggagataggtcaggtgaccggcggctggcgcgatctgtcgctg
aagaatatccgttacgaccagccaggcgtggcggtcaacgccggggaagttcacctggcc
gtggggctggagtgcctgtggaaaagcagcctgtgcgtgaacgatctgtcgctgaaggac
attaacgtcgtcatcgacagcaaaaagatgccgccaggcgaacaggttgaagaagaggaa
gagagcggcccgctgaatctctccaccccctatccggtcaccctttcccgcgtcgcgctg
gaaaacatcaacgttaaaatcgatgacaccaccgtctcggtgatggattttacctccggc
ctgaactggcaggagaaaaacctgaccctgaagccgaccgcgttgcaggggctgctgatc
gcgctgccgaaggtggcggaagtggcccaggaagaggtggttgagccgaagatccagaac
ccgcagccggatgaaaaaccgctcggcgagacgttacaggatctattctcaaagccagtc
ctgccggaaatgaccgacgttcatctgccgctcaatcttaatatcgaggagtttaaaggc
gaacagctgcgtctcacgggcgataccgatctgacggtctttagcctgctgctgaaggtg
agcagcatcgacggcaatatgaagctagatgcgctggacatcgactccagtcagggagcg
gttaacgcgaccggtaccgcgcagctggccaataactggccggtggatattaccctcaac
agtacgctgaacgtcgagccgctgaagggcgagaagatcaagctgaaggtgggcggcgcg
ctgcgcgagcagctggaagtgggggtcaatctttccggcccgctggatgtgaatctgcgg
gcgcaggcgcggctggcggaggccgggctgccgctcaatctggaagtggtcagcgagcag
atatcctggccgtttaccggcgacaggcagttccaggccgataatacccgccttaaactc
accggcaaaatgaccgattacaccctgtcgatgcgcacggcggtgaaagggcaggatgtg
ccgccagccaccatcacgctggatgccaaaggcaacgaacaacagatcaacctcgacaag
cttaccgttgcggcgctggaaggaaaaaccgagctgaaagcgctggtggactggcggcag
gcgatcagctggcgcggcgaactgacgctggacggcatcaacaccgcaaaagaggtgccg
gactggccgtcgaagctaaacggcctgatcaaaacccgcggcagcctgtatggcggcagc
tggcagatggaggtgccggagctgaagctgaccggcaacgttaagcagaacaaggttaac
gtcaacggttcgctgaagggcaacagctacatgcagtggaccatccctggcctgcacctg
gtgctggggccaaacagcgctgatgtgaaaggcgagctgggggtcaaggatctcaacctg
gacgccaccatcgacgcgccggggctggataacgcgctgccgggactgggcggaacggcg
aaagggctggtgaaagtgcgcggtacggtcgacgcgccgcagctgctggcggatattacc
gcccgtggcctgcgctggcaggagctttccatcgctcaggtacgggtggacggtgacatc
aaatcgaccgaccagattgccggtaagcttgatgtccgggtggagcgcatctcgcagccg
gatgtgaatatcaatctcgtcactctgcatgccaaaggcagcgaaaagcagcacgaactc
cagctgcggattcagggcgagccggtttccgggcagctcgatctggccggtagctttgac
cgtgaagagatgcgctggaaaggcacgctgagcaatacccgcttccgcacgccggtggga
ccgtggtcgcaaacccgcgccatcgcgctggactatcgcggtcaggagcaaaaaatcagt
atcgggccgcactgctggaccaacccgaacgccgagctgtgcgtgccgcaaacgatagat
gccggcgcggaaggccgggcggtggtgaatctcaaccgtttcgatctggcgatgctgaag
ccgtttatgccggagacgacccaggccagcggcgtgtttagcggcaaagctgacgtggcg
tgggacaccaccaaagaagggctgccgcagggcaacgtcacgctttccggacgcagcgtg
aaggtgacgcagacggtcaacgacgcgccgctgccgctggcgtttgacaccctgaacgtc
agcgccgatctgcatgacaaccgcgcggagctgggctggcagatccgcctgagcaacaac
ggtcaactggacgggcaggtgcaggtgaccgatccgcaggggcgtcgcaatctgggcggc
aacgtaagcatccgcaatcttaacctggcgatggtgaatccgatcttcgcccgcggcgaa
aaagcggcggggttgctgaacgcgaacctgcgcctgggcggcgatgtgcaaagcccgcag
atgtttggtcagctgcagctgaacggcgtggatatcgacggtaactttatgccgttcgat
atgcagccgagccagctggcgatgaacttcaacgggacgcgctcaacgcttaccggcgtg
gtgcgtacccagcagggagagattaacctgagcggcgacgccgactggagccagatcgag
aactggcgcgcgcggatagcggcgaaaggaagccgggtgcggatcaccgtaccgccgatg
gtgcgtctggacgtgtcgccggacgtggtatttgaggcgacgccaagcctgttcaccctc
gatggccgcgtggatgtgccgtgggcgcgtatcgtagtgcatgagctgccggaaagcgcg
gtgggcgtttccagcgacgaagtgatgctgaataatcaactccagccggaggagccgcag
accgccgcgatccccatcaacagcaatctgatcgtgcatgtcggcaataacgtgcggatg
gacgccttcgggctgagagcgcgtctgaccggcgatctgaaggtggcgcaggataaacag
gggctggggctgaacgggcagatcaatataccggaaggccgattccacgcctacgggcag
gatctgctggtgcgcaaaggtgaactgctgttctccggtccgccggatcagccgatattg
aatatcgaagcgattcgtaacccggaggcgacagaagacgacgtgatcgccggcgttcgc
gtcaccggttcggcagatgagccgaaggcggagatcttctccgatccggcgatgtcgcag
caggaggcgctctcttacctgttacgcggccagggtctggacagtaaccagagcgacagc
gcggcgatgacctcaatgcttattggtctgggggttgcacaaagtggtcaggttgtgggt
aaaatcggggagacattcggcgtaagcaatttggcgctggacacgcagggggtcggagat
tcatcccaggtggtggtcagcggatatgtattgcctggtctgcaggtgaaatatggcgtg
gggatattcgactcattagccacgctcacgctacgttaccgcctgatgcctaagctatat
ctggaagccgtgtctggcgtagaccaggcactggatttgctctatcagtttgagttttag
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