Citrobacter rodentium: ROD_33781
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Entry
ROD_33781 CDS
T01145
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
cro
Citrobacter rodentium
Pathway
cro03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROD_33781 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cro03032
]
ROD_33781 (dnaB)
Enzymes [BR:
cro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ROD_33781 (dnaB)
DNA replication proteins [BR:
cro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ROD_33781 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
HTH_40
DEAD
Motif
Other DBs
NCBI-ProteinID:
CBG90092
UniProt:
D2TP22
LinkDB
All DBs
Position
complement(3554734..3556089)
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AA seq
451 aa
AA seq
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MSKRKRSQPPHSVEAEQSVLGGLMLDNDRWDDVATQISAQDFFISTHRTIYSHMQTLVEQ
GNPIDLITLSESLEQQEQLEQVGGFAYLAELSKNTPSAANIIPYAQYIASYGELRQLLLL
GNELSDMAGQPRSNVADVLNFAEQKLFAIAQSHQDGGLTDISAYFDNVLAGIAQRYEAER
GSLSGTPSGLEQLDALTCGFQPADLIIAAARPSVGKTAFALTLCVNALMLLPTQPVQIYS
MEMSAEQLLLRLVSLIGHVSQIRLRSGDLSDDDWQQIGLSANILMNEWKDRLLLDDSGIL
TPSLLRSRARRSLRQYGLPSLIVVDYLQLMRSGGAENRNLEISTISRSLKALAKELNCPV
LALSQLNRALESRLNKRPCNADLRDSGSIEQDADVILFLYRDELYDPNTLDRGIAEVIVS
KQRNGPIGTVRTRFISDQTRFESLNQQGVGS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcgcaaacggtcacaaccgccccactctgtcgaagcggaacaatccgtgctc
ggcggactgatgctggataacgatcgctgggatgacgtagccacgcagatttccgcgcag
gacttctttatatccacgcaccgcactatctatagccatatgcaaaccctggtcgaacaa
ggaaaccctatcgacctgatcaccctgagcgaatcgctggaacagcaggagcaactcgaa
caggtgggcggttttgcttatctggcggagctttccaaaaacacacccagcgccgccaat
atcattccctacgcgcaatacattgccagctacggtgaactgcgccagctactgttatta
ggcaatgaactgagcgatatggcaggccagccgcgcagcaatgtggccgatgtgctgaat
tttgccgaacaaaagctgtttgccattgcgcagtcgcatcaggatggcggcctgaccgac
atcagcgcctactttgacaacgtgctggctggcatcgctcagcgctatgaggcagaacgc
ggtagcctcagcggcacgccatccgggctggaacagctcgacgccctgacctgcggcttc
cagcctgccgacctgattatcgccgccgcacgcccttccgtaggtaaaaccgctttcgcc
ctgacgctgtgcgtcaacgcgctaatgctcctccccacccagccagtacaaatctacagc
atggaaatgtcggcagagcagctactgctgcggctggtttctctgattggccatgtctcg
cagatccggctacgcagcggtgatctcagtgatgacgactggcagcagattggcctcagc
gccaatatcctgatgaacgagtggaaagatcgtctgctgctcgacgactccgggatcctc
accccatccctgctacgcagtcgggccagacgatcgctgcgccagtacgggcttccctcc
ctgatcgtggttgattacctgcaactgatgcgcagcggcggcgcggagaaccgcaatctg
gagatctcgacgatctcccgctcgctaaaagcgctggcgaaggaattaaattgcccggtg
ctggcgctgtcgcagcttaaccgggcgctggagtcacgccttaacaagcgcccctgtaat
gccgatctgcgcgattccggctctatcgagcaggatgccgacgtgatcttattcctctac
cgcgacgagctgtatgatcccaacacgctggatcgtggtatcgccgaagtcattgtcagc
aaacagcgcaacggcccgattggcacggtgcgcacccgatttatcagcgatcaaacccgc
ttcgaatcgctcaaccagcaaggagtcgggtcatga
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