Citrobacter rodentium: ROD_36051
Help
Entry
ROD_36051 CDS
T01145
Symbol
ttdR
Name
(GenBank) LysR-family transcriptional regulator
KO
K21742
LysR family transcriptional regulator, transcriptional activator for ttdABT operon
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_36051 (ttdR)
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ROD_36051 (ttdR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CBG90315
UniProt:
D2TRQ5
LinkDB
All DBs
Position
complement(3799561..3800496)
Genome browser
AA seq
311 aa
AA seq
DB search
MLNNYPLAKDLQVLVEIVHTGSFSAAAAALGQTPAFVTKRIQILESALATTLLNRSARGV
ALTECGQRCYEHALEILTRYQRLVDEVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMR
NYPELQVHFELFDRQIDLAQDNIDLDIRINDAIPDYYIAHLLTKNSRILCAAPAYLKKYS
EPKTLQELSRHDCLVTKERDMTHGIWELGNGKEKKSVKVSGHLSSNSGEIVLQWALEGKG
IMLRSEWDVQPFLASGKLVRVLPEYAQSANIWAVYREPLYRSVKLRVCVEFLAAWCQQRL
GRPDEGYQAAR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaactatcctttagcgaaagacctgcaggtgctggttgaaattgtccatacg
ggaagctttagcgcggcggcggcggccctcggacaaacgccggcgttcgtgacgaaacgg
atccagattctggagtccgcgctggccaccacgctgctcaaccgctcggcaagaggggtg
gcgctcaccgagtgcggacaacggtgctatgaacatgcgctggagatcctgacccgctat
cagcggctggtggatgaggtaacgcaaattaaaacgcgtccggaagggatgattcgtatt
ggctgtagcttcggttttggccgtagccatattgcgcccgccattaccgaactgatgcgc
aattatccggagctacaggtccattttgagctttttgatcggcaaatcgatttagcgcag
gataatatcgacctggatattcggattaatgacgccataccggattattatattgcgcat
ctgttaacaaaaaacagcaggatattatgcgcggcgcccgcctacctgaaaaaatattcg
gagccgaaaaccttgcaggaattaagccgccacgattgtctggtgacgaaagagcgtgat
atgacgcacgggatctgggaattaggcaacggtaaggagaaaaaatcggtaaaagtgagc
gggcatctgtcgtcgaatagcggggaaattgtgctgcaatgggcgctggaggggaagggg
attatgctgcgctccgagtgggacgtgcagccgtttctggcgagcggcaaactggtgcgg
gtgttacctgagtatgcccagagcgcgaatatctgggcggtctatcgggaaccgctatat
cgcagcgtgaagctaagggtctgcgtcgagtttctggcggcgtggtgccagcagcggtta
ggcaggccggatgaggggtatcaggcggcgcgctaa
DBGET
integrated database retrieval system
