Citrobacter rodentium: ROD_38121
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Entry
ROD_38121 CDS
T01145
Symbol
cytR
Name
(GenBank) LacI-family transcriptional repressor
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_38121 (cytR)
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ROD_38121 (cytR)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
CBG90516
UniProt:
D2TU50
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Position
4019448..4020473
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AA seq
341 aa
AA seq
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MKPKKLVAAATMKDVAEKAKVSTATVSRALMNPEKVSQATRSRVEQAALAVGYLPQAAGR
HIKRNESRTILVIVPDICDPFFSEIIRGIEVTAARHGYLVLIGDCAHQNQQEKTFVNLIV
TKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLH
ELGHQRIGCIAGPEEMPLCHYRLQGYVQALRRCGIVVDPHYIARGDFTFEAGGNALKQLL
ALPLPPTAVFCHSDVMALGALSWAKRQGLKVPDDLSIVGFDNIALAEFCDPPLTTVAQPR
FGIGQEAMLLLLDQMQGQNVSSGSRLMDCELILRGSTRALT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgaaaaagctggttgctgccgcgactatgaaagatgttgccgagaaggcgaaa
gtctcaacggcaaccgtatcccgcgcgttaatgaacccggaaaaagtctcccaggccacc
cgcagccgggttgaacaggccgcactggctgtcggctatttgccgcaggcggcgggacgc
cacattaaacgtaatgaatcgcggacgattctggtgattgtcccggatatttgcgatccg
ttctttagcgaaatcattcgcggcattgaagttaccgccgccagacatggctatctggtg
ctgatcggcgactgcgcgcatcagaatcagcaggaaaaaacgttcgttaacctgatcgtt
accaaacagattgacgggatgctgctgctgggctcacgcctgccattcgatgccagcatt
gaagaacagcgcaatttgccgccaatggtgatggcaaacgaatttgccccggagctggag
cttcccacggttcacattgataacctgaccgccgccttcgatgccgtcaactatctgcat
gagctgggccatcagcgcatcggctgcattgccgggccggaagagatgccgctgtgccat
taccgcctgcagggctatgtccaggcgctgcgccgctgcggcattgtggtcgatccgcac
tatatcgcccgcggcgactttacctttgaggcgggcggcaatgcgttaaagcagctgctg
gcgctaccgctgccccccacggcggtgttctgccatagcgacgtgatggcgcttggcgcc
ctctcatgggctaaacgccaggggctaaaggtcccggacgatctgtcgatcgttggtttc
gacaacatcgcgctggccgagttttgcgatcccccgctgacaacggtggcgcagccgcgc
ttcgggattggacaggaagcgatgctgctgttgctcgatcaaatgcaggggcagaatgtc
agcagcggctcgcgtttaatggactgtgagctgatcctgcggggctcaacgcgtgcttta
acgtaa
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