Citrobacter rodentium: ROD_38971
Help
Entry
ROD_38971 CDS
T01145
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cro
Citrobacter rodentium
Pathway
cro03030
DNA replication
cro03410
Base excision repair
cro03420
Nucleotide excision repair
cro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROD_38971 (polA)
03410 Base excision repair
ROD_38971 (polA)
03420 Nucleotide excision repair
ROD_38971 (polA)
03440 Homologous recombination
ROD_38971 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cro03032
]
ROD_38971 (polA)
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_38971 (polA)
Enzymes [BR:
cro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ROD_38971 (polA)
DNA replication proteins [BR:
cro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ROD_38971 (polA)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ROD_38971 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROD_38971 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CBG90601
UniProt:
D2TUX7
LinkDB
All DBs
Position
complement(4110921..4113707)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLTFRGAKTMAGKLEQNK
EVAYLSYKLATIKTDVELELTCEQLEVKQPIADELLDLFRKYEFKRWTADVEAGKWLQAK
GAKPAAKPQETLVIDESPDEATAALSYENYVTILDEATLKAWIAKLEKAPVFAFDTETDS
LDNITANLVGLSFAVEPGVAAYVPVAHDYLDAPDQIARDRALELLKPLLEDEKVSKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVMIDPAVLHKHSEEITLRLAELEQKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIPPKDHVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLETVTNEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDGWLESEQPRVRMIMQVHDELVFEVHKDDLDVVSKKI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatccttgtagacggctcctcttatctctatcgc
gcataccatgcgtttccaccgctgaccaacagcgctggcgaaccgaccggcgcgatgtac
ggcgtcctcaacatgctgcgcagcctgatcatgcagtaccagccgacgcatgccgcagtg
gtgtttgatgccaagggtaaaaccttccgtgacgaattatttgaacactataaatcgcat
cgcccgccgatgccggacgacctgcgcgcgcaaatcgaaccgctgcacgcgatggttaaa
gcgatgggattgccattgctggcggtatccggcgtagaagcggacgatgttatcggaacc
ctggcgcgtgaagcggaaaaagcaggccgtccggtgctgatcagtaccggggataaagat
atggcccagttggttacgccgaacattacgcttatcaacaccatgaccaatacgattctg
ggtccggaggaagtggttaataaatatggcgtgccgcccgagctgattatcgacttcctg
gcgctaatgggcgactcatctgacaatattccgggcgtaccgggcgtgggcgaaaaaacc
gcccaggcactgctgcagggtctgggtgggctggatactctgtatgccgaatcagacaaa
attgccgggctgaccttccgcggcgccaaaacgatggcgggcaagctggaacaaaataaa
gaggtggcttatctctcgtataagctggcgacgataaaaaccgacgtcgaactggagtta
acctgcgaacagctggaagtgaaacagcccatcgccgatgagctgttggacctgttccgg
aaatatgagttcaaacgctggaccgccgatgtcgaagccggtaagtggctacaggcgaaa
ggggcaaagcctgccgctaagccacaggaaaccctcgttattgacgaatcgcccgatgag
gctaccgctgcgctttcttatgaaaactacgtcactattcttgatgaagcgacgctgaaa
gcgtggatcgcgaagctggaaaaagcgcctgtcttcgcctttgataccgagacggacagc
ctcgataacatcactgccaatctggtggggctgtcatttgcggttgaacccggcgtggcg
gcctatgtgccggtcgcccacgattatctggacgcgccggatcagatcgcccgcgatcgc
gcgctggagctgctgaaaccgctgctggaagatgagaaggttagcaaggtcgggcaaaac
ctgaagtacgatcgcggtattctggccaactatggcattgaactgcgcggcattgctttt
gatacgatgctggagtcgtacatcctgaacagcgtcgccgggcgtcacgatatggacagc
ctgtctgaccgctggctgaagcacaaaaccattacctttgaagagattgcaggcaagggc
aaaaatcaactgaccttcaaccagatcgcgctggaagaggcggggcgctatgcggctgaa
gatgcggacgtcacgctacagctgcatctgaaaatgtggccagagcttcagcagcataaa
ggcccgctgaacgtatttgaaaatatcgaaatgccgctggtgccggtgctgtcccgcgtt
gagcgtaacggcgtgatgatcgatcccgccgtgctgcataagcactctgaagaaatcacg
ttgcgtctggcggagctggagcagaaggcgcatgacattgccggtgaggcgtttaacctc
tcatccactaagcagctgcaaaccattctgtttgaaaaacaggggatcaagccgctgaag
aaaacccctggcggcgcgccgtccacatcggaagaggtactggaagagctggcgctggat
tatccgttaccgaaggtgattcttgagtatcgcggcctggcgaagctgaaatcgacctac
accgacaagctgccgctgatgatcaacccgaaaacaggacgtgtccatacctcctatcat
caggcagtaaccgccaccgggcgactgtcgtctaccgatccgaacctgcaaaacattccg
gtacgcaatgaagaagggcgtcgtatccgtcaggcgtttattccgccgaaggatcacgtc
attgtttccgctgactattcgcagattgagttacgcattatggcgcacctgtcgcgcgat
aaggggctgctgacggcgtttgccgaaggtaaggacattcaccgcgcgaccgcggcggaa
gtgtttggtttaccgctggagacggtgacgaacgaacagcgtcgcagcgcgaaggcgatt
aactttggcctgatctacgggatgagcgcattcggtctggcgcgccagctgaacattccg
cgtaaggaagcgcagaagtatatggatctctacttcgagcgttatccaggcgtgctggaa
tatatggagcgcacgcgcgcccaggcgaaagagcagggctacgttgaaacgctggaaggg
cgtcgcctctacctgccggatattaaatccagtaacggcgcgcgccgcgctggcgctgaa
cgtgcggcgatcaacgccccgatgcaggggactgccgccgatatcattaaacgcgcgatg
attgccgtagatggctggctggaaagcgagcagccgcgcgtgcggatgatcatgcaggtg
cacgatgaactggtattcgaagtgcataaagacgacctcgacgtcgtctcgaaaaagatt
caccaactgatggaaaactgtacgcgcattgatgtgccgttgctggtggaagtgggaagc
ggtgaaaactgggatcaggcgcactaa
DBGET
integrated database retrieval system
