Citrobacter rodentium: ROD_39531
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Entry
ROD_39531 CDS
T01145
Symbol
rffT
Name
(GenBank) putative ECA polymerase
KO
K02853
enterobacterial common antigen polymerase [EC:
2.4.99.27
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_39531 (rffT)
Enzymes [BR:
cro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.27 O-antigen polymerase Wzy
ROD_39531 (rffT)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
O-antigen repeat unit
ROD_39531 (rffT)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WzyE
TMEM171
Motif
Other DBs
NCBI-ProteinID:
CBG90655
UniProt:
D2TV31
LinkDB
All DBs
Position
complement(4175418..4176770)
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AA seq
450 aa
AA seq
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MSLMQFSGLFAVWLLATLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFR
FDVGVAPPEILLQALLSAACFYAVYYVTYKTRLRKRVSDAPRKPLFTMNRVETQLTWVVL
MGIALVSVGIFFMHNGFLLFRLHSYSQIFSSEVSGVALKRFFYFFIPAMLVVYFLRQDSK
AWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM
FWLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDKIAFQGLAPIVRDFYVF
IPSWLWPGRPTMVLNAANYFTWEVLNNHSGLAISPTLIGSLVVMGGAPFIPLGALVVGLI
IKWFDWLYELGNRETNRYKAAILHSFCFGAIFNMIVLAREGLDSFVSRVVFFLVVFGACL
LMAKLLFWLFASAGLIHKRIKTLPGKQVEG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatgcagttcagcggtctgtttgccgtctggctactcgcgacgctgtttatc
gccaccttaacgtggttcgagtttcgccgtgtgcgctttaacttcaacgtctttttctca
ctgctgtttttgctgaccttcttttttggttttccgctgaccagcgtgctggtgttccgc
tttgacgtcggcgtcgcgccgccggaaattttgctacaggcgctgctctccgccgcctgt
ttctacgcggtctattacgtcacttataagacccgcttacgcaaacgggtaagcgatgcc
ccacgcaaaccgctgtttaccatgaaccgcgtggagacccaactgacctgggtggtgctg
atgggcatcgcgctggtcagcgtcggtatcttcttcatgcacaatggttttctgctgttt
cgcctgcactcttacagccagattttctccagcgaagtctccggcgtggcgttaaagcgc
ttcttctacttttttattccggcgatgctggtggtctattttctgcgtcaggacagcaaa
gcctggctgtttttcctcgtcagcaccgtggcgtttggtctgctgacctatatgattgtc
ggcggcacgcgcgccaatatcatcatcgccttcgctattttcctgtttatcggcattatc
cgcggctggatctcgctgtggatgctggcggctgcgggcgtgctgggcattgtcggcatg
ttctggctggcgctaaaacgctacgggctgaacgtcagtggcgatgaggcgttctatacc
ttcctctatctgacccgcgataccttttcaccgtgggaaaatctggcgctactgctgcaa
aattacgacaagatcgcgtttcaggggctggcgccgatcgttcgcgacttttatgtgttt
atcccttcctggctgtggccggggcgtccgacgatggtgctgaacgcggcgaactacttt
acctgggaagtgctgaacaaccactccgggctggcgatttcgccgacgctgatcggatcg
ctggtggtgatgggcggtgcgccgtttattccgctgggcgcgctcgtggtgggactgatc
atcaaatggttcgactggctgtatgagctgggaaaccgggaaactaaccgctacaaggcg
gcgattttgcatagtttctgcttcggcgcgatattcaatatgatcgtgctggcccgggaa
gggctggactcgtttgtatcgcgcgtggtttttttccttgtggtttttggcgcctgtctg
ctgatggcaaaactgctgttctggctgtttgccagcgccgggctgatccataaacgcata
aaaacactgccaggcaaacaggttgaaggatag
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