Citrobacter rodentium: ROD_41811
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Entry
ROD_41811 CDS
T01145
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cro
Citrobacter rodentium
Pathway
cro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROD_41811 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_41811 (mutM)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ROD_41811 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ROD_41811 (mutM)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ROD_41811 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CBG90879
UniProt:
D2TIW7
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All DBs
Position
4409692..4410501
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGAKILHAHVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDDFNGDYLLQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSQADCELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIIATKHAQRATFYCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtagaaaccagccgccgcggtattgagccgcatctggtcggg
gcgaagattctgcacgcccatgtgcgtaatggacgtctgcgctggccggtatcagaagag
atctaccgtcttagcgaccaaccggtgctcagcgttcagcgacgcgcgaaataccttctg
ctggagcttcccgacggctggatcattatccatcttggaatgtcaggcagtttacggatc
ctttcggaagaacttcccgcggaaaagcacgaccacgtcgatttagtcatgagtaacggt
aaagtgctgcgctataccgatcctcgccgctttggcgcctggctatggacgaaagagctg
gaaggacacaacgtgctggcgcacctggggccagagccgctgagcgatgatttcaatggc
gactatctgctgcagaagtgcgcgaagaagaaaacggcgattaaaccctggctgatggac
aataaactggtggtgggcgtcggcaatatctacgccagcgagtcgctgttcgcggcgggc
atccatcccgatcgcctggcgtcgtcgctgtcccaggcggactgtgagctgctggtgcgg
gtgattaaagccgttttactgcgctcgattgagcagggcgggaccacgctgaaggatttc
ctgcaaagcgacggcaagccgggctactttgctcaggaactgcaggtgtatggtcgtaaa
ggcgagccgtgcagggtctgcggaacgccgattattgcgacaaaacacgcccagcgcgcg
acgttttactgtcggcgctgtcagaagtaa
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