Citrobacter rodentium: ROD_41851
Help
Entry
ROD_41851 CDS
T01145
Symbol
rfaQ
Name
(GenBank) heptosyl-III-transferase
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
cro
Citrobacter rodentium
Pathway
cro00540
Lipopolysaccharide biosynthesis
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ROD_41851 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_41851 (rfaQ)
Enzymes [BR:
cro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
ROD_41851 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Core region
ROD_41851 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
DUF2334
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
CBG90883
UniProt:
D2TIX1
LinkDB
All DBs
Position
4412769..4413803
Genome browser
AA seq
344 aa
AA seq
DB search
MRFHGDMLLTTPVISTLKQNYPEAKIDMLLYQDTIPILSENPDISGLYGISNKGAGATEK
IKNALSLIKILRANQYDLVINLTDQWMVALIVRCLSARTKISQLYGHRQRGFWKNSFTCL
APIQGTHIVERNLSVLEPLGITDFYQDTTMSYKPERWQKIRQELDAFGVKAHYVVIQPTA
RQLFKCWDNDKFSRVIDALQRRGYQVVLTSGPSADDLACVEEIAQGCEIRPVTGLAGKTS
FPELGALIDHADLFIGVDSAPGHIAAAVKTPVVSLFGATDHVFWRPWTDNIIQFWAGDYQ
AMPERHELDRNKKYMSVIPAEDVIAATEKMLPQIAQPGEMEAPV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttccacggggatatgctactaaccactcccgttatcagtacgctgaagcagaat
tatcctgaagcaaaaatcgatatgcttctttatcaggacacgatccctattttgtctgaa
aaccctgatatttctggcctttatggcatcagtaataagggggcgggggccacagagaaa
attaaaaatgcgctttcgctgattaaaatattacgtgctaatcagtacgatttggtcatt
aaccttaccgatcaatggatggtggcgctgattgttcgttgtctgtccgcaagaacgaaa
atttcgcagctgtatggtcaccgacagcgtggtttctggaaaaatagttttacctgctta
gcgccaatacagggtacgcacattgttgaacggaatttgtctgtgctggagcctttaggt
attactgatttttatcaggatacaacaatgagctataagcccgagcgctggcagaaaatc
cgccaggagttggatgcgtttggcgttaaggcgcactatgtcgttatccagccgacggca
agacagctgtttaaatgctgggataacgacaagttttctcgcgtgattgacgccttacag
cgtcgcggttatcaggtcgtgctgacatcggggccgtctgcggatgatttagcctgcgtg
gaagagattgcgcaggggtgtgaaatccgtcctgttaccgggttggccggtaaaaccagt
tttcctgaactgggcgcgttaattgatcatgccgatctctttattggcgtggattccgct
cctggccacattgccgcggcagtaaaaacacctgttgtcagtttgtttggcgctaccgac
catgttttctggcgcccctggacggataatattattcagttctgggccggagattatcag
gccatgcctgaacgccatgaactggatcgtaacaagaaatatatgtcggttatccccgca
gaagatgtgattgccgccacggaaaaaatgttgccgcagattgcgcaacctggtgaaatg
gaagcgccggtatga
DBGET
integrated database retrieval system
