Citrobacter rodentium: ROD_41941
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Entry
ROD_41941 CDS
T01145
Symbol
rfaK
Name
(GenBank) lipopolysaccharide 1,2-N-acetylglucosaminetransferase
KO
K03280
UDP-N-acetylglucosamine:(glucosyl)LPS alpha-1,2-N-acetylglucosaminyltransferase [EC:
2.4.1.56
]
Organism
cro
Citrobacter rodentium
Pathway
cro00540
Lipopolysaccharide biosynthesis
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ROD_41941 (rfaK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_41941 (rfaK)
Enzymes [BR:
cro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.56 lipopolysaccharide N-acetylglucosaminyltransferase
ROD_41941 (rfaK)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Core region
ROD_41941 (rfaK)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_trans_1_2
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CBG90892
UniProt:
D2TIY0
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All DBs
Position
4421592..4422740
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AA seq
382 aa
AA seq
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MINKIIFTVTPIFSIPPKGAAAVETWIYQVAKRTTIPTTIACIRNPGYPEYAKIDDGCDI
HYIGFSRLYKRIFQKWTRIDPLPYSQRILNIKNKVAGSNDSVIIIHNSMKLYRQIRQRSP
NANLVMHIHNAFEPEQLDRNAKIIVPSQFLKDFYEKRLPDAEVRIVPNGFCSSTYAENKT
DNLRQQLGIDSADTVLLFAGRISPDKGCLPLLQAFEKMQEKQKNLKLVVVGDPYASKKGE
KASYQKVVLETAEKIGPRCIMVGGQPPEKMHEYYRLADLVVVPSQVEEAFCMVAVEAMAA
GKPVLASKKGGICEFVLDGSTGYHLAEPITVDSLIDDIGRVLDDEKRDEIAENARRYVFS
KYSWESVTESFEKQIFSWFGSE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataagataatatttactgttacgcctatcttttctattcccccaaaaggtgcc
gcggcagtcgagacatggatttatcaggttgcgaagaggacgacaatacccactaccatt
gcctgtatccgtaatcccggatatccggaatatgcaaagattgatgatggatgtgatata
cactatatcggttttagtcgcctctataaaagaattttccaaaaatggacgcgtattgat
ccattgccctactcgcagcgaatattgaatataaaaaataaagttgctggttcgaatgat
tctgtgattattattcataacagtatgaagctttatcgacagatccgccaacgaagccca
aatgctaatctggttatgcatatacacaatgcgtttgaacctgagcaactggatcgaaat
gcaaagatcatcgtgccaagtcagtttctgaaagatttttatgaaaagcgattaccggat
gccgaagttcgtatcgtgccaaatggattttgctcttcgacttatgcagaaaataaaaca
gataacctgcggcaacaacttggtatagattccgctgatactgttttgttatttgcaggc
cgaatttcccccgataaaggatgtctacctttactgcaagcttttgaaaaaatgcaggaa
aaacaaaagaaccttaaacttgttgtagtcggcgatccttatgcgagcaaaaaaggggaa
aaggccagttaccaaaaagtcgtgcttgagacagctgaaaaaatagggccgcgctgtatt
atggtgggtgggcagccccctgaaaaaatgcatgaatactaccgcttagccgatcttgtc
gttgtgccttcgcaggtcgaagaggctttttgtatggttgctgtagaagctatggctgcg
ggtaagcctgtattagccagtaaaaagggcggaatttgtgaatttgtccttgatggttcg
acaggttaccatttggcagagcctattactgttgacagcttaatcgatgatatcggccgc
gtgctggatgatgaaaaacgcgatgaaatagccgaaaatgccagacgctatgttttttca
aagtacagttgggaatctgttactgaatcttttgagaaacaaatattttcctggtttggc
tcagaataa
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