Citrobacter rodentium: ROD_41951
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Entry
ROD_41951 CDS
T01145
Symbol
rfaL
Name
(GenBank) lipid A-core:O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
cro
Citrobacter rodentium
Pathway
cro00540
Lipopolysaccharide biosynthesis
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ROD_41951 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_41951 (rfaL)
Enzymes [BR:
cro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
ROD_41951 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Core region
ROD_41951 (rfaL)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
CBG90893
UniProt:
D2TIY1
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All DBs
Position
complement(4422794..4424011)
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AA seq
405 aa
AA seq
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MLTTSLNVNNRENWKPYWNRALVFLFIATFFLDGITRYKHLISALMIVTVIYQFSRAPKK
YISRFNNHLFYSILALSLILIYAILISPDMRISFKEFNNTVLKGFLLYTLLIPVLLKDED
SQTVGKLILFSFLTSLGLRSLVELFLYAQDYNKGIMPFTTFEHRSISDSMVFLFPALLNL
WLFKKKSYKAIFFVFSAVFLFLILGTLSRGAWLAIFIVAILWAICNRQWKLLTLGAILFA
ATSFFVVTQKTDNADHERLLFKLQQTDSSYRYTNGTQGTAWILITENPFKGYGYGDDIYH
EVYNKRVQDYPSWTFKQSIGPHNLILCIWFAAGISGLLGLLYVYGAIIKETASGSLKNKE
ISPYNGQLLLLLTFIGFYILRGNFEQVDADLLGIITGFLLALRNK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgacatcattaaatgtaaataacagagaaaactggaagccctactggaacaga
gcactggtatttctttttattgctactttctttcttgacggtattacacgttacaaacat
ttgatttctgcactgatgattgtaaccgttatatatcaattctcgcgtgcgcctaagaaa
tacatcagccgttttaataaccatctgttttacagcatcctggcgctgtcattgatatta
atttatgctattttaatatcgccggatatgcgaataagttttaaagagtttaataatacg
gtattaaaaggatttttactttatactttattaatccctgtattattaaaagatgaggat
agccaaactgttggtaaacttatcctcttttcttttctcacaagtttaggtttacgctcg
cttgtcgaactatttctgtacgcgcaagattataataaaggtataatgccgtttaccact
tttgagcacagaagcatttctgactcaatggtatttttattccctgcgctactgaactta
tggttatttaaaaagaaatcatataaagcaatattctttgtattcagtgctgtttttctt
tttttaattctcggaaccttatcgcgtggcgcatggctagcaatttttattgttgccatt
ctctgggcaatatgtaatcgacagtggaagctcctcaccctgggcgccatcctgtttgcc
gccacatcattttttgttgtgacgcaaaaaactgataatgcagaccacgaacgacttctg
ttcaaactgcaacaaacggatagctcttatcgttatacaaacggcacgcagggtactgca
tggatactcatcaccgaaaatccgtttaaaggctatggatatggcgatgatatctatcat
gaggtatataataaacgcgttcaggattatccgtcatggactttcaagcaatcaattggt
ccacataacctgatactgtgtatctggttcgccgcgggtatttcaggcctgcttggattg
ctgtatgtttacggcgcaattatcaaagaaacggcaagtggttcattaaagaacaaggag
ataagtccatacaatgggcagttattattactgctgacatttattggattctatatcctg
cgcgggaattttgaacaggtcgatgcagatttactcggcataataacaggttttctgtta
gcgttaagaaataaataa
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