Citrobacter rodentium: ROD_41961
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Entry
ROD_41961 CDS
T01145
Symbol
rfaC
Name
(GenBank) lipopolysaccharide heptosyltransferase 1
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
cro
Citrobacter rodentium
Pathway
cro00540
Lipopolysaccharide biosynthesis
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ROD_41961 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_41961 (rfaC)
Enzymes [BR:
cro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
ROD_41961 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Core region
ROD_41961 (rfaC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Epimerase_2
UPF0181
Thioredoxin_9
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
CBG90894
UniProt:
D2TIY2
LinkDB
All DBs
Position
complement(4424047..4425003)
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AA seq
318 aa
AA seq
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MRVLIVKTSSMGDVLHTLPALTDAQQAIPDIQFDWVVEEGFAQIPSWHAAVNRVIPVAIR
RWRKAWFSAAVKAERKAFREAVQAERYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQSAR
EPLASLFYNRRHHIARQQHAVERTRELFAKSLGYQKPDAQGDYAIAQHFLTSDKADAQPY
AVFLHATTREDKHWPEANWRALIGLLAESDIKIKLPWGAPHEEARAKRLAEGFPQVEVLP
KMSLEEVAHVLAGAKFVVSVDTGLSHLTAALDRPNLTLYGPTDPGLIGGYGKNQVACRSP
EKDLAQLDAINVFKKINP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttctgatcgtcaaaacatcctcaatgggtgacgtattgcatacgcttccggcg
ctcaccgatgcgcagcaggccataccggacattcagttcgactgggtggtcgaagaaggg
tttgcgcaaatcccttcgtggcatgccgcagtcaaccgggttattccggtggcgattcgt
cgctggcgtaaagcctggttttccgcggcggttaaagcggaacgcaaagcctttcgtgaa
gcggtacaggcagaacgttacgatgccgtcattgatgcccaggggctggtgaaaagcgcc
gcgctggtgacgcgtctggcgcatggcgttaagcatggcatggactggcaaagcgcacgc
gagccgctggccagcctgttctacaaccgccgccatcatattgccaggcagcaacatgcc
gttgagcgtacccgggaactgtttgctaaaagcctgggatatcaaaagcctgacgctcag
ggcgattatgccatcgcgcagcattttcttacctcagacaaggctgatgcgcaaccctac
gcggtatttttgcatgccacaacccgcgaggataaacactggccggaagcaaactggcga
gcgctgattggcttactggcagagagcgacataaaaattaagttgccgtggggcgcgcct
catgaagaagcgcgggcaaaaagattagcggagggattcccgcaggttgaagtgctgccg
aagatgagcctggaggaagtcgcgcacgttctggcaggcgcaaaatttgtggtttcggtt
gatacgggattaagccatctgacggcagcgcttgatcgaccaaacctgacgttatatggc
cctacggatccagggttaattggtggttacgggaagaatcaggtggcgtgtcggtcgccg
gagaaggatctcgctcaattagatgcgattaatgtattcaaaaaaattaatccataa
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