Citrobacter rodentium: ROD_41971
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Entry
ROD_41971 CDS
T01145
Symbol
rfaF
Name
(GenBank) ADP-heptose-LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
cro
Citrobacter rodentium
Pathway
cro00540
Lipopolysaccharide biosynthesis
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ROD_41971 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_41971 (rfaF)
Enzymes [BR:
cro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
ROD_41971 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Core region
ROD_41971 (rfaF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CBG90895
UniProt:
D2TIY3
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All DBs
Position
complement(4425007..4426053)
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG
HGALEIGLRRKLGHSLREKRYDHAWVLPNSFKSALVPFFAGVPQRTGWRGEMRYGLLNDV
RMLDKQAWPLMVERYVALAYDKGVMRSAKDLPQPLLWPQLQVSDGEKSLTCREFSLSDER
PLIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQIVLFGSAKDHEAGNEILAALSPEQQ
AWCRNLAGETQLDQAVILIGACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSH
KARVIRLITGYHKVRKGDAAEGYHQSLIDITPARVLEELNSLLLQEEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttggtgatcggcccgtcctgggtgggcgacatgatgatgtcgcaaagtctc
tatcgcacgctcaaggcacgctatccccaggcgataatcgacgtgatggcacccgcctgg
tgccgcccactgttgtctcgtatgccggaagtgaacgaggcgattccaatgcctctcggt
catggggcgctggaaattggcctgcgccgcaagctcggccatagcctgcgtgaaaagcgt
tacgatcacgcctgggtgctgcccaactctttcaaatccgcccttgtccccttttttgcg
ggtgttccgcagcgcaccggctggcgcggcgagatgcgctatggtctgctgaacgacgta
aggatgctggataaacaggcctggcctttgatggtggagcgctacgtggcgctggcctat
gacaaaggggtgatgcgttcggcgaaagatctgccacagccgctgctatggccgcagctt
caggtgagcgacggcgagaagtcgctcacctgccgtgagttttccctttccgatgaacgt
ccgctgatcggcttctgccctggcgcggagtttggccccgcgaagcgctggccgcactat
cactacgcggaactggcgaagcagcttattgatgaaggctatcagattgtgctgttcgga
tcggcgaaagaccatgaagccggcaatgaaatcctggcggcgttaagcccggaacagcag
gcctggtgccgtaatctggcgggagaaacgcagctggatcaggcggttattttgattggc
gcctgtaaagcggtggtcaccaatgactccgggctgatgcacgtcgccgcggcgctggac
cgtccgttggtcgcgctgtacggccccagcagccccgacttcacgccgccgttatcgcat
aaagcgcgcgtgattcgcctgatcaccggctatcacaaagtacgtaaaggcgatgccgcg
gaaggttatcaccagagtctgatcgacataacgccagcgcgagtgctggaagagctgaac
agcctgttattacaagaggaagcctga
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