Citrobacter rodentium: ROD_41981
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Entry
ROD_41981 CDS
T01145
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cro
Citrobacter rodentium
Pathway
cro00541
Biosynthesis of various nucleotide sugars
cro01100
Metabolic pathways
cro01250
Biosynthesis of nucleotide sugars
Module
cro_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ROD_41981 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
ROD_41981 (rfaD)
Enzymes [BR:
cro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
ROD_41981 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cro01005
]
Core region
ROD_41981 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
CBG90896
UniProt:
D2TIY4
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All DBs
Position
complement(4426133..4427113)
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AA seq
326 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEADSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGETPKLFEGSENFKRDFVYVGDVADVNLWFWENGVSGIYNLGTGRA
ESFQAVADATLAFHKKGEIEYIPFPEKLKGRYQAFTQADLTNLRTAGYDKPFKTVAEGVT
EYMAWLNRDSDTNSQNHSSGIKAATK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacattgttaaggccctgaat
gataaaggcatcaccgatatcctggtggtggacaacctgaaagacggcaccaagtttgtt
aacctggtggatctgaacattgccgattatatggataaagaagatttcttaatccagatt
atggcgggtgaagagttcggcgagatcgaagccattttccacgaaggcgcttgctcctcc
accaccgagtgggacggcaagtacatgatggataacaactatcagtactccaaagagctg
ctgcactattgcctggagcgcgagatcccgttcctgtacgcctcttccgccgccacctac
ggcggtcgcacctccgactttattgaatcccgtgaatatgagaagccgctgaatgtctac
ggctactcgaagtttctgtttgacgaatacgtgcgtcagattctgccggaagccgattcg
cagatcgtgggcttccgctatttcaacgtctacgggccgcgtgaagggcataaaggcagc
atggcgagcgtcgctttccatctcaacacccagttgaataacggcgaaacgccgaagctg
tttgaaggcagcgaaaactttaagcgtgacttcgtctacgtgggcgatgtggctgatgta
aatctgtggttctgggaaaacggcgtgtccggtatctataacctcggcaccggtcgcgcg
gaatccttccaggcggtggctgacgcgacgctggccttccataaaaaaggcgagattgag
tacatcccgttcccggaaaaactgaaaggccgctatcaggcatttactcaggcggatctg
acgaatctgcgcactgcgggctacgacaagccgtttaagaccgttgccgaaggcgtaacg
gagtatatggcctggctgaaccgcgacagcgatacaaattcacaaaatcattcgagcggt
atcaaggcggcaaccaagtga
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