Citrobacter rodentium: ROD_42471
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Entry
ROD_42471 CDS
T01145
Symbol
glyS
Name
(GenBank) glycine-tRNA synthetase, beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
cro
Citrobacter rodentium
Pathway
cro00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ROD_42471 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cro01007
]
ROD_42471 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cro03016
]
ROD_42471 (glyS)
Enzymes [BR:
cro01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
ROD_42471 (glyS)
Amino acid related enzymes [BR:
cro01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ROD_42471 (glyS)
Transfer RNA biogenesis [BR:
cro03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ROD_42471 (glyS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
CBG90944
UniProt:
D2TJU6
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All DBs
Position
4479438..4481507
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AA seq
689 aa
AA seq
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MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVAK
LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWVRGCGITVDQAERLTTDKGEWLLYRA
HVKGESAEALLPNMVAASLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDNVIPATILGI
QSDRVIRGHRFMGEPQFTIDNADQYPQILLERGKVIADYEARKAKIKADAIEAARKIGGN
ADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKLLPN
FIFVANIESKDPQQIVSGNEKVVRPRLADAEFFFNTDRKKRLEDHLPRLQTVLFQQQLGT
LRDKTDRIQALAGWIAGQTGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD
GEAEDVAVALNEQYQPRFAGDELPSNPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFAL
RRAALGVLRIIVEKNLNLDLQTLTEEAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEG
YSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEAASALAAANKRVSNILAKSDETLNER
VNAATLKEPEEIALAMQVVVLRDKLEPFFAEGRYQEALVELAELREPVDAFFEKVMVNVE
DKELRINRLTMLEKLRELFLRVADISLLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaaacttttctggtggaaatcggcactgaagagctgccgccaaaagccctg
cgcagcctggcggagtcctttgctgcaaacgtgactgcggagctggataacgccggcctc
gcacacggcaacgttgaatggtttgccgcaccgcgtcgcctggcgctgaaagtggcgaaa
ctggctgaatcccagcccgatcgcgaagtggaaaagcgtggtccggcaatcgcccaggca
ttcgatgctgaaggcaagccgagcaaagcggcggaaggctgggtgcgtggctgcgggata
accgttgaccaggccgagcgtctgaccaccgacaaaggcgaatggctgctgtatcgcgcg
catgtgaaaggcgagagcgccgaagcgctactgccgaatatggttgccgcttcgctggcg
aaactgccaatcccgaaactgatgcgctggggcgcgtctgacgtccattttgtgcgtccg
gttcatactgtgaccctgctgctgggcgacaatgtgatcccggcgacgattctgggcatt
cagtccgatcgcgtgattcgcggccatcgctttatgggcgagccgcagttcaccatcgat
aacgccgaccagtacccgcagattctgctggagcgcggtaaagtcattgcggactacgaa
gcgcgtaaagccaaaatcaaagcggacgcgattgaggcggcgcgtaaaataggtggtaac
gccgatctgagcgaaagtctgctggaagaagtcacctcgctggtggaatggccggtggtg
ctgaccgcgaaattcgaagaaaaattcctcgcggtgccgtctgaagcgctggtttacacc
atgaaaggtgaccagaaatacttcccggtttacgccaacgacggcaaactgctgccgaac
tttatcttcgttgccaatatcgaatcgaaagacccgcagcagattgtctccggtaatgag
aaggtggttcgcccgcgtctggcggatgctgagttcttcttcaataccgaccgtaaaaaa
cgtctggaagatcatctgccgcgtctgcaaaccgtgctgttccagcagcagttgggaacg
ctgcgcgacaagaccgatcgcattcaggcgctggcgggctggattgccggtcagactggc
gccgacgtcaaccacgcgacccgcgcgggcctgctctccaaatgcgacctgatgaccaac
atggtcttcgagttcaccgatacgcagggcgtgatgggcatgcattacgcgcgtcatgat
ggcgaagcggaagatgtggccgtggcgctgaacgagcagtatcagccgcgttttgccggt
gatgaactgccgtctaacccggtggcttgtgcggtggcgatcgccgataaaatggacacc
ctggcgggtatcttcggcattgggcagcacccgaagggcgacaaagacccgtttgcgttg
cgtcgtgcggcactgggcgtactgcgtattatcgttgagaagaacctgaatctggatctg
cagaccctcaccgaagaagcggcgcgtctgtacggcgataagctgactaacgccaacgtt
gtggatgatgtgatcgactttatgcttggccgcttccgcgcctggtatcaggacgaaggt
tacagcgtggataccattcaggcggtgctggcgcgtcgtcctacccgtccggcagacttt
gacgcgcgcatgaaggccgtttcgcacttccgcacgctggaagcggcgtccgcgctggcg
gcggcgaacaagcgtgtttccaacattctggctaagtccgatgaaacgctgaacgagcgc
gtgaacgccgcgacgctgaaagagccggaagagatcgctctggcaatgcaggtcgtagtg
ttgcgcgacaagctggagccgttctttgccgaaggccgttaccaggaagcgctggtggaa
ctggctgaactgcgcgaaccggtcgatgccttcttcgagaaggtaatggtaaacgtagaa
gataaagagctgcgtattaaccgactgaccatgctcgaaaaactgcgtgagttgttcctg
cgcgtggcggatatttcgctgctgcaataa
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