Citrobacter rodentium: ROD_43611
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Entry
ROD_43611 CDS
T01145
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cro03021
]
ROD_43611 (rpoH)
Transcription machinery [BR:
cro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ROD_43611 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_AsnC-type
HTH_3
2Fe-2S_thioredx
SANT_DAMP1_like
HTH_25
Motif
Other DBs
NCBI-ProteinID:
CBG91057
UniProt:
D2TKU3
LinkDB
All DBs
Position
4607081..4607935
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AA seq
284 aa
AA seq
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MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSPDDESDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAASKLTHAMEGLDERSQAII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaaatttagctttagcccctgttggtaacctggagtcttacatc
cgggctgcgaacgcgtggccgatgttgtcggctgacgaagagcgggcgctggctgaaagg
ctgcattaccagggcgatctggaagcagctaagacgctgatcctgtctcacctgcgcttt
gttgttcatattgctcgtaactacgcgggctatggcctgccgcaggcggatttgattcag
gaaggcaacatcggcctgatgaaagccgtgcgccgcttcaacccggaagtgggcgtgcgc
ctggtctccttcgccgtgcactggatcaaagctgagatccacgaatacgtactgcgtaac
tggcgtatcgtgaaggtcgcgaccaccaaagcgcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaatcaggatgaagtggaaatggtggcccgcgag
ctgggtgtttccagcaaagacgtgcgtgagatggaatcccgtatggcggcgcaggacatg
acctttgacatgtccccggacgacgagtccgatagccagccgatggcgccggtactgtat
ctgcaggataaaacctctaactttgccgatggcattgaagaggacaactgggaagatcag
gccgccagtaagctgactcatgcgatggaaggccttgacgagcgtagccaggcgatcatc
cgcgcccgctggctggacgaagacaacaagtccaccctgcaggaactggccgaccgctat
ggcgtctccgccgagcgggttcgccagcttgaaaagaacgcgatgaaaaaactgcgcgcc
gctatcgaagcataa
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