Citrobacter rodentium: ROD_45531
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Entry
ROD_45531 CDS
T01145
Symbol
fis
Name
(GenBank) DNA-binding protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_45531 (fis)
03036 Chromosome and associated proteins [BR:
cro03036
]
ROD_45531 (fis)
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_45531 (fis)
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
Other families
ROD_45531 (fis)
Chromosome and associated proteins [BR:
cro03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ROD_45531 (fis)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ROD_45531 (fis)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
Inhibitor_I24
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CBG91250
UniProt:
D2TNC0
LinkDB
All DBs
Position
complement(4800127..4800423)
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AA seq
98 aa
AA seq
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MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactctcaggat
caggtaactcaaaaacccctgcgtgactcggttaaacaggcactgaagaactattttgct
caactgaacggtcaggacgttaatgacctgtatgagctggtactggctgaagttgaacag
cccctgttggacatggtgatgcaatacacccgtggtaaccagacccgtgctgccctgatg
atgggcatcaaccgtggtacgctgcgtaaaaaactgaaaaaatacggcatgaactaa
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