Citrobacter rodentium: ROD_46591
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Entry
ROD_46591 CDS
T01145
Name
(GenBank) putative polysaccharide degrading enzyme
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
cro
Citrobacter rodentium
Pathway
cro00520
Amino sugar and nucleotide sugar metabolism
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
ROD_46591
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
ROD_46591
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
DUF3300
DUF7393
MTHFR
SH3_2
Motif
Other DBs
NCBI-ProteinID:
CBG91354
UniProt:
D2TPC1
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All DBs
Position
complement(4913613..4915934)
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AA seq
773 aa
AA seq
DB search
MRLKPSRIAIMIASCLLSANALAEIRANDDTNKIEGTYNKSLMRSTDNGESWLELGISDG
INQGKNNDFPGTETVVVANKLDDVMKTPLYDPTLSYGTANTRVRYDGYYWTNQWWANPGE
IPGKNAVWLKGAATNLEQNIVGTYNFTPWQGQQAEDYQVDQKSKVAKQTRIYGYYPEWGV
YEAHNYFTPDKIAWDQLTHLAYAFGVVKNGVVVTHDTEKGPTLMKEIANSSRQAGVKNIL
SIGGWTNSEEGAFETATATPEGVEKLAQSIVDYVVKWKFDGVDIDWEYPDTEVEKMQFTD
LLTNLRNKLDVLGKQNDIYYQLSAAVTVNHKNIAYINPKVTAPLLDSVNVMAYDIHGAFD
PITGHNAPLYANSQDADQKLNVSATINEYVNTWNVPKSKITMGVPFYGRGWGEVNPTEII
KGLPGLFAPGSATVHGAWDDKDQFTGTNPFYVLQEKIASGDYTRYWDAESHVPYLYNAKT
REFLTYDDEASITDKVNYIKDQALGGAIIWDISGDSSDHTLGKIVATLKNSDSDDDDGDG
DDAADETGVVSYLNLKPGANRGLIFDSKTDRYVMYPGIYTEMPLTEFKNGVFDIRLNNVS
VAKSKKGYVSEGKSGNKEQTAYILTNRLTINEGDVITVVRQDGDKEYVDASKTVTREMLG
HAVFDESGVLKDVYIAGSSTTDHAIQLLTDGFIDTRYEIYLNDQYVASADIQNTGDCVTE
NMECGWKTAKRVLYSTVASIVVKENDNVKVYHIDGDKKTLAAALTVPRGLDYY
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaaccttccaggatcgctattatgatcgcgtcctgcctgttatcagcgaat
gcgctggccgaaataagagcgaatgacgatacgaataaaattgaaggaacttataataag
agtttgatgcgttcaactgataatggtgaaagctggttagaattaggcatcagtgatgga
atcaatcagggtaaaaacaacgattttccgggtacggaaacggtcgtcgtggccaacaaa
cttgacgacgtgatgaaaacaccgctgtatgacccaacattgtcttacggcaccgcgaat
acgagagtacgttatgacggctattactggacaaaccagtggtgggctaaccctggcgaa
atccctggcaagaacgcagtctggttaaaaggcgccgcgactaacctcgaacagaatatt
gtcggaacttataactttaccccctggcaaggacagcaggcggaagactatcaggtagat
caaaaaagcaaggtagcgaaacaaacccgcatttatggttactatcctgaatggggcgtg
tatgaggcgcacaattactttacgccggataaaattgcctgggatcagctcacccatctg
gcgtatgcattcggcgtggtaaaaaatggtgtcgtcgtgacgcacgatactgagaaaggc
ccaaccttaatgaaagaaatagccaacagcagcaggcaggcgggcgtaaaaaatattctt
tcaattggcggctggaccaactctgaagaaggcgcatttgaaacagcaaccgccacgccg
gaaggagttgaaaaactggcgcaaagcatcgtcgactacgtcgttaaatggaaattcgat
ggggttgatatcgactgggagtatcctgacactgaagttgaaaaaatgcagttcaccgat
cttcttaccaacctgcgtaataaacttgatgtgctgggtaaacaaaacgatatctactat
cagctgtcggcggcagttacggtaaaccataagaatatcgcttatattaaccctaaggtg
acggcccctctgcttgattccgttaacgtgatggcatacgacatccacggcgctttcgat
cccattacgggccacaatgcgccgctgtatgccaatagccaggatgcagatcaaaagctg
aatgtgtctgcaacgataaatgaatatgtaaacacctggaatgtaccaaaaagcaaaatt
accatgggggttcccttctatggtcgtggatggggagaggttaatccaacggaaatcatt
aaagggttgccgggattatttgcgccagggagcgcaaccgtacacggcgcctgggatgat
aaagaccagtttaccggaacgaatcctttctatgtcctgcaggaaaaaattgccagcgga
gattacacgcgctattgggatgcggaatcgcatgttccctatctgtacaatgcgaaaacc
agagagttcctgacctatgatgatgaagcgtctatcactgataaagtgaattacatcaaa
gaccaggcattgggcggcgcaatcatctgggatatcagcggtgattccagcgaccatacg
ttagggaaaattgttgcgacgcttaaaaatagcgacagcgacgacgatgatggggatggt
gatgatgctgccgacgaaacaggcgtcgtctcctatttgaacttaaagcccggcgctaac
cgtggactcatttttgacagcaaaacagatcgttacgttatgtatcccggcatttatact
gaaatgcctctgacggaatttaaaaacggcgtttttgatattcgtctgaataatgtttct
gtagcaaaaagcaaaaagggttatgtcagtgaaggtaaatccggcaataaagagcaaacc
gcctatattctcacgaacagattaaccattaatgaaggcgatgttattactgttgttcgt
caggatggcgataaagagtatgttgacgcctcaaaaaccgttacccgggaaatgctcgga
catgccgtttttgacgaaagtggcgtgttaaaagatgtctacattgccggttccagtacc
acagaccatgctattcagctgttgacggatggctttattgatacgcgttacgagatctac
ctcaacgaccagtatgtcgccagcgccgatatccagaatacaggtgattgcgtaacggaa
aatatggagtgcggctggaaaactgcgaaaagagtcctttacagcacggttgccagcatt
gtggttaaggaaaatgataacgttaaggtctatcacattgacggggataagaaaacgctg
gccgctgcgctgacggtcccccgtggtcttgattactattaa
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